Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCN1P35523 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.14■□□□□ 0.81
CLCN1P35523 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.14■□□□□ 0.81
CLCN1P35523 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CLCN1P35523 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCN1P35523 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLCN1P35523 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.14■□□□□ 0.81
CLCN1P35523 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCN1P35523 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN1P35523 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.13■□□□□ 0.81
CLCN1P35523 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN1P35523 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CLCN1P35523 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.13■□□□□ 0.81
CLCN1P35523 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.13■□□□□ 0.81
CLCN1P35523 AC026471.5-201ENST00000615068 467 ntBASIC20.13■□□□□ 0.81
CLCN1P35523 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CLCN1P35523 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.12■□□□□ 0.81
CLCN1P35523 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CLCN1P35523 KRT8P45-201ENST00000414328 1447 ntBASIC20.12■□□□□ 0.81
CLCN1P35523 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CLCN1P35523 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 TCAF2P1-201ENST00000291129 2421 ntBASIC20.12■□□□□ 0.81
CLCN1P35523 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CLCN1P35523 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CLCN1P35523 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.12■□□□□ 0.81
CLCN1P35523 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.12■□□□□ 0.81
CLCN1P35523 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.12■□□□□ 0.81
CLCN1P35523 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.12■□□□□ 0.81
CLCN1P35523 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.12■□□□□ 0.81
CLCN1P35523 DGCR10-201ENST00000609839 495 ntBASIC20.12■□□□□ 0.81
CLCN1P35523 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.12■□□□□ 0.81
CLCN1P35523 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.12■□□□□ 0.81
CLCN1P35523 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.12■□□□□ 0.81
CLCN1P35523 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CLCN1P35523 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.12■□□□□ 0.81
CLCN1P35523 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.12■□□□□ 0.81
CLCN1P35523 KRT18P55-202ENST00000578578 1546 ntBASIC20.12■□□□□ 0.81
CLCN1P35523 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CLCN1P35523 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
CLCN1P35523 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CLCN1P35523 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CLCN1P35523 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CLCN1P35523 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CLCN1P35523 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLCN1P35523 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.11■□□□□ 0.81
CLCN1P35523 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.11■□□□□ 0.81
CLCN1P35523 AL355355.2-201ENST00000442321 338 ntBASIC20.11■□□□□ 0.81
CLCN1P35523 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.11■□□□□ 0.81
CLCN1P35523 AC097488.1-201ENST00000507834 756 ntBASIC20.11■□□□□ 0.81
CLCN1P35523 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms