Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC6A4P31645 AL031284.1-201ENST00000419297 478 ntBASIC18.12■□□□□ 0.49
SLC6A4P31645 AC073648.2-201ENST00000510116 352 ntBASIC18.12■□□□□ 0.49
SLC6A4P31645 AC079776.4-201ENST00000511039 504 ntBASIC18.12■□□□□ 0.49
SLC6A4P31645 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SLC6A4P31645 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC6A4P31645 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
SLC6A4P31645 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC6A4P31645 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC6A4P31645 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A4P31645 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC6A4P31645 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC6A4P31645 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC6A4P31645 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A4P31645 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC6A4P31645 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC6A4P31645 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC6A4P31645 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A4P31645 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC6A4P31645 AC005104.2-201ENST00000427818 678 ntBASIC18.11■□□□□ 0.49
SLC6A4P31645 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A4P31645 RPS2P1-201ENST00000434010 821 ntBASIC18.11■□□□□ 0.49
SLC6A4P31645 SLC25A6P5-201ENST00000435663 894 ntBASIC18.11■□□□□ 0.49
SLC6A4P31645 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC6A4P31645 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SLC6A4P31645 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.11■□□□□ 0.49
SLC6A4P31645 MTDHP4-201ENST00000600287 670 ntBASIC18.11■□□□□ 0.49
SLC6A4P31645 AC064862.7-201ENST00000604520 867 ntBASIC18.11■□□□□ 0.49
SLC6A4P31645 MIR7706-201ENST00000613747 67 ntBASIC18.11■□□□□ 0.49
SLC6A4P31645 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC6A4P31645 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC6A4P31645 SIGLEC16-201ENST00000599858 1437 ntBASIC18.11■□□□□ 0.49
SLC6A4P31645 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A4P31645 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A4P31645 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
SLC6A4P31645 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A4P31645 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SLC6A4P31645 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A4P31645 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A4P31645 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A4P31645 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC6A4P31645 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SLC6A4P31645 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
SLC6A4P31645 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SLC6A4P31645 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SLC6A4P31645 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLC6A4P31645 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SLC6A4P31645 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC6A4P31645 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SLC6A4P31645 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC6A4P31645 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC6A4P31645 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SLC6A4P31645 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC6A4P31645 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC6A4P31645 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 AC002558.1-201ENST00000488906 803 ntBASIC18.1■□□□□ 0.49
SLC6A4P31645 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC6A4P31645 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
SLC6A4P31645 AP001005.1-201ENST00000571755 1248 ntBASIC18.1■□□□□ 0.49
SLC6A4P31645 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC6A4P31645 STK25P1-201ENST00000585406 838 ntBASIC18.1■□□□□ 0.49
SLC6A4P31645 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC6A4P31645 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC6A4P31645 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SLC6A4P31645 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC6A4P31645 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SLC6A4P31645 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC6A4P31645 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
SLC6A4P31645 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
SLC6A4P31645 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC6A4P31645 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC6A4P31645 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC6A4P31645 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms