Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC1P29353 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHC1P29353 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
SHC1P29353 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC1P29353 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC1P29353 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC1P29353 AL845331.1-201ENST00000424978 1190 ntBASIC16.22■□□□□ 0.19
SHC1P29353 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.22■□□□□ 0.19
SHC1P29353 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SHC1P29353 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.22■□□□□ 0.19
SHC1P29353 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.22■□□□□ 0.19
SHC1P29353 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
SHC1P29353 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC1P29353 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
SHC1P29353 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC1P29353 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC1P29353 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
SHC1P29353 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
SHC1P29353 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.21■□□□□ 0.19
SHC1P29353 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.21■□□□□ 0.19
SHC1P29353 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.21■□□□□ 0.19
SHC1P29353 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHC1P29353 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.21■□□□□ 0.19
SHC1P29353 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SHC1P29353 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SHC1P29353 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.21■□□□□ 0.19
SHC1P29353 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
SHC1P29353 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 KRT18P65-201ENST00000439811 1286 ntBASIC16.21■□□□□ 0.19
SHC1P29353 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.21■□□□□ 0.19
SHC1P29353 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.21■□□□□ 0.19
SHC1P29353 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.21■□□□□ 0.19
SHC1P29353 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.21■□□□□ 0.19
SHC1P29353 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.21■□□□□ 0.19
SHC1P29353 AC091607.1-201ENST00000490318 1060 ntBASIC16.21■□□□□ 0.19
SHC1P29353 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.21■□□□□ 0.19
SHC1P29353 AP002414.4-201ENST00000589764 1148 ntBASIC16.21■□□□□ 0.19
SHC1P29353 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.21■□□□□ 0.19
SHC1P29353 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 AC092119.3-201ENST00000612618 583 ntBASIC16.21■□□□□ 0.19
SHC1P29353 IGHV3-41-201ENST00000613121 348 ntBASIC16.21■□□□□ 0.19
SHC1P29353 AC124864.1-201ENST00000623408 392 ntBASIC16.21■□□□□ 0.19
SHC1P29353 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
SHC1P29353 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SHC1P29353 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.21■□□□□ 0.18
SHC1P29353 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHC1P29353 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
SHC1P29353 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHC1P29353 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.21■□□□□ 0.18
SHC1P29353 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHC1P29353 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SHC1P29353 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.21■□□□□ 0.18
SHC1P29353 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 AC100803.2-201ENST00000562459 1963 ntBASIC16.2■□□□□ 0.18
SHC1P29353 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 AC124067.4-201ENST00000519691 2379 ntBASIC16.2■□□□□ 0.18
SHC1P29353 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.2■□□□□ 0.18
SHC1P29353 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.2■□□□□ 0.18
SHC1P29353 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.2■□□□□ 0.18
SHC1P29353 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SHC1P29353 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.2■□□□□ 0.18
SHC1P29353 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.2■□□□□ 0.18
SHC1P29353 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.2■□□□□ 0.18
SHC1P29353 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.2■□□□□ 0.18
SHC1P29353 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
SHC1P29353 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.2■□□□□ 0.18
SHC1P29353 AC068472.1-201ENST00000474589 881 ntBASIC16.2■□□□□ 0.18
SHC1P29353 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.2■□□□□ 0.18
SHC1P29353 MIR3180-1-201ENST00000580374 94 ntBASIC16.2■□□□□ 0.18
SHC1P29353 MIR3180-3-201ENST00000584616 94 ntBASIC16.2■□□□□ 0.18
SHC1P29353 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.2■□□□□ 0.18
SHC1P29353 AC009154.2-201ENST00000621177 724 ntBASIC16.2■□□□□ 0.18
SHC1P29353 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SHC1P29353 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms