Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC005332.1-201ENST00000577698 1310 ntBASIC16.78■□□□□ 0.28
PTPN6P29350 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN6P29350 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
PTPN6P29350 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.78■□□□□ 0.28
PTPN6P29350 HLA-F-220ENST00000434407 884 ntBASIC16.78■□□□□ 0.28
PTPN6P29350 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.78■□□□□ 0.28
PTPN6P29350 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.78■□□□□ 0.28
PTPN6P29350 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.78■□□□□ 0.28
PTPN6P29350 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.78■□□□□ 0.28
PTPN6P29350 AL136038.4-201ENST00000603606 1261 ntBASIC16.78■□□□□ 0.28
PTPN6P29350 AL358472.4-201ENST00000633140 710 ntBASIC16.78■□□□□ 0.28
PTPN6P29350 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PTPN6P29350 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.78■□□□□ 0.28
PTPN6P29350 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PTPN6P29350 AL391807.1-203ENST00000604392 2365 ntBASIC16.78■□□□□ 0.28
PTPN6P29350 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PTPN6P29350 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PTPN6P29350 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
PTPN6P29350 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PTPN6P29350 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.77■□□□□ 0.28
PTPN6P29350 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.77■□□□□ 0.28
PTPN6P29350 PCED1CP-201ENST00000419887 785 ntBASIC16.77■□□□□ 0.28
PTPN6P29350 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 VENTXP5-201ENST00000523979 775 ntBASIC16.77■□□□□ 0.28
PTPN6P29350 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 AC091076.1-201ENST00000610741 619 ntBASIC16.77■□□□□ 0.28
PTPN6P29350 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.77■□□□□ 0.28
PTPN6P29350 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PTPN6P29350 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.77■□□□□ 0.27
PTPN6P29350 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN6P29350 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN6P29350 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.77■□□□□ 0.27
PTPN6P29350 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN6P29350 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PTPN6P29350 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN6P29350 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PTPN6P29350 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PTPN6P29350 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN6P29350 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN6P29350 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PTPN6P29350 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN6P29350 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.76■□□□□ 0.27
PTPN6P29350 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN6P29350 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN6P29350 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN6P29350 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.76■□□□□ 0.27
PTPN6P29350 AP000550.4-202ENST00000639755 178 ntBASIC16.76■□□□□ 0.27
PTPN6P29350 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN6P29350 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN6P29350 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN6P29350 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
PTPN6P29350 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN6P29350 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN6P29350 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN6P29350 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PTPN6P29350 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.76■□□□□ 0.27
PTPN6P29350 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN6P29350 AC124067.4-201ENST00000519691 2379 ntBASIC16.75■□□□□ 0.27
PTPN6P29350 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PTPN6P29350 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN6P29350 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN6P29350 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN6P29350 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PTPN6P29350 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN6P29350 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.75■□□□□ 0.27
PTPN6P29350 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN6P29350 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN6P29350 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.75■□□□□ 0.27
PTPN6P29350 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN6P29350 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PTPN6P29350 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms