Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CAPN3P20807 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.03■□□□□ 0.32
CAPN3P20807 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 AC117947.1-201ENST00000427448 529 ntBASIC17.03■□□□□ 0.32
CAPN3P20807 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.03■□□□□ 0.32
CAPN3P20807 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.03■□□□□ 0.32
CAPN3P20807 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 AC024243.1-201ENST00000609234 778 ntBASIC17.03■□□□□ 0.32
CAPN3P20807 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CAPN3P20807 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CAPN3P20807 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CAPN3P20807 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.03■□□□□ 0.32
CAPN3P20807 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CAPN3P20807 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CAPN3P20807 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.03■□□□□ 0.32
CAPN3P20807 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CAPN3P20807 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN3P20807 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.02■□□□□ 0.32
CAPN3P20807 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN3P20807 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN3P20807 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN3P20807 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.02■□□□□ 0.32
CAPN3P20807 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN3P20807 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.02■□□□□ 0.32
CAPN3P20807 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN3P20807 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CAPN3P20807 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN3P20807 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN3P20807 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN3P20807 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.02■□□□□ 0.32
CAPN3P20807 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN3P20807 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.02■□□□□ 0.32
CAPN3P20807 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CAPN3P20807 TSPY5P-201ENST00000426936 936 ntBASIC17.02■□□□□ 0.32
CAPN3P20807 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.02■□□□□ 0.32
CAPN3P20807 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CAPN3P20807 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.02■□□□□ 0.32
CAPN3P20807 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.02■□□□□ 0.32
CAPN3P20807 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.02■□□□□ 0.32
CAPN3P20807 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CAPN3P20807 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CAPN3P20807 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CAPN3P20807 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CAPN3P20807 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CAPN3P20807 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.02■□□□□ 0.31
CAPN3P20807 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CAPN3P20807 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CAPN3P20807 AC106886.4-201ENST00000623557 2502 ntBASIC17.02■□□□□ 0.31
CAPN3P20807 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.02■□□□□ 0.31
CAPN3P20807 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.01■□□□□ 0.31
CAPN3P20807 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CAPN3P20807 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CAPN3P20807 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.01■□□□□ 0.31
CAPN3P20807 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.01■□□□□ 0.31
CAPN3P20807 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.01■□□□□ 0.31
CAPN3P20807 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CAPN3P20807 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN3P20807 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN3P20807 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CAPN3P20807 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CAPN3P20807 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.01■□□□□ 0.31
CAPN3P20807 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.01■□□□□ 0.31
CAPN3P20807 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CAPN3P20807 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CAPN3P20807 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
CAPN3P20807 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17■□□□□ 0.31
CAPN3P20807 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CAPN3P20807 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17■□□□□ 0.31
CAPN3P20807 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms