Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.4■□□□□ 0.22
PRKCAP17252 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.4■□□□□ 0.22
PRKCAP17252 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.4■□□□□ 0.22
PRKCAP17252 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.4■□□□□ 0.22
PRKCAP17252 FAM86EP-206ENST00000510506 987 ntBASIC16.4■□□□□ 0.22
PRKCAP17252 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.4■□□□□ 0.22
PRKCAP17252 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.4■□□□□ 0.22
PRKCAP17252 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.4■□□□□ 0.22
PRKCAP17252 AL390719.2-201ENST00000606993 987 ntBASIC16.4■□□□□ 0.22
PRKCAP17252 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.4■□□□□ 0.22
PRKCAP17252 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.4■□□□□ 0.22
PRKCAP17252 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
PRKCAP17252 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.4■□□□□ 0.22
PRKCAP17252 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PRKCAP17252 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
PRKCAP17252 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PRKCAP17252 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PRKCAP17252 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
PRKCAP17252 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
PRKCAP17252 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PRKCAP17252 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKCAP17252 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
PRKCAP17252 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
PRKCAP17252 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.39■□□□□ 0.21
PRKCAP17252 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKCAP17252 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PRKCAP17252 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 Z83836.1-201ENST00000624605 1642 ntBASIC16.39■□□□□ 0.21
PRKCAP17252 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKCAP17252 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKCAP17252 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKCAP17252 DUTP2-201ENST00000519164 463 ntBASIC16.39■□□□□ 0.21
PRKCAP17252 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.39■□□□□ 0.21
PRKCAP17252 AL445228.2-201ENST00000605589 952 ntBASIC16.39■□□□□ 0.21
PRKCAP17252 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PRKCAP17252 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKCAP17252 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKCAP17252 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PRKCAP17252 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
PRKCAP17252 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 AC005332.1-201ENST00000577698 1310 ntBASIC16.39■□□□□ 0.21
PRKCAP17252 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PRKCAP17252 LINC00896-202ENST00000609602 2128 ntBASIC16.39■□□□□ 0.21
PRKCAP17252 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.39■□□□□ 0.21
PRKCAP17252 AC068418.2-201ENST00000577309 3703 ntBASIC16.39■□□□□ 0.21
PRKCAP17252 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PRKCAP17252 AL353692.3-201ENST00000407031 1396 ntBASIC16.38■□□□□ 0.21
PRKCAP17252 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.38■□□□□ 0.21
PRKCAP17252 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.38■□□□□ 0.21
PRKCAP17252 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PRKCAP17252 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.38■□□□□ 0.21
PRKCAP17252 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.38■□□□□ 0.21
PRKCAP17252 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PRKCAP17252 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.38■□□□□ 0.21
PRKCAP17252 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.38■□□□□ 0.21
PRKCAP17252 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PRKCAP17252 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.38■□□□□ 0.21
PRKCAP17252 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PRKCAP17252 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms