Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
PTPRFP10586 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PTPRFP10586 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
PTPRFP10586 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PTPRFP10586 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.09■□□□□ 0.81
PTPRFP10586 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.09■□□□□ 0.81
PTPRFP10586 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.09■□□□□ 0.81
PTPRFP10586 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PTPRFP10586 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.09■□□□□ 0.81
PTPRFP10586 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.09■□□□□ 0.81
PTPRFP10586 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PTPRFP10586 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.09■□□□□ 0.81
PTPRFP10586 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPRFP10586 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.09■□□□□ 0.81
PTPRFP10586 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.09■□□□□ 0.81
PTPRFP10586 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPRFP10586 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPRFP10586 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.08■□□□□ 0.81
PTPRFP10586 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPRFP10586 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.08■□□□□ 0.81
PTPRFP10586 AC140658.5-201ENST00000438532 169 ntBASIC20.08■□□□□ 0.81
PTPRFP10586 BCRP1-201ENST00000444246 691 ntBASIC20.08■□□□□ 0.81
PTPRFP10586 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPRFP10586 AC093520.2-201ENST00000561830 333 ntBASIC20.08■□□□□ 0.81
PTPRFP10586 Z92544.3-201ENST00000624747 417 ntBASIC20.08■□□□□ 0.81
PTPRFP10586 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.08■□□□□ 0.81
PTPRFP10586 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPRFP10586 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPRFP10586 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PTPRFP10586 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.08■□□□□ 0.8
PTPRFP10586 AC093503.3-201ENST00000624917 2352 ntBASIC20.08■□□□□ 0.8
PTPRFP10586 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.08■□□□□ 0.8
PTPRFP10586 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPRFP10586 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.08■□□□□ 0.8
PTPRFP10586 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPRFP10586 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.08■□□□□ 0.8
PTPRFP10586 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PTPRFP10586 SPDYE11-202ENST00000450699 704 ntBASIC20.08■□□□□ 0.8
PTPRFP10586 AC074386.1-202ENST00000463561 864 ntBASIC20.08■□□□□ 0.8
PTPRFP10586 AL135744.1-201ENST00000565098 629 ntBASIC20.08■□□□□ 0.8
PTPRFP10586 SPDYE9P-201ENST00000570642 692 ntBASIC20.08■□□□□ 0.8
PTPRFP10586 SPDYE10P-202ENST00000612005 668 ntBASIC20.08■□□□□ 0.8
PTPRFP10586 SPDYE8P-202ENST00000612377 668 ntBASIC20.08■□□□□ 0.8
PTPRFP10586 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPRFP10586 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPRFP10586 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPRFP10586 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPRFP10586 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPRFP10586 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.07■□□□□ 0.8
PTPRFP10586 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPRFP10586 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPRFP10586 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPRFP10586 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPRFP10586 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.07■□□□□ 0.8
PTPRFP10586 COX20P2-201ENST00000452636 358 ntBASIC20.07■□□□□ 0.8
PTPRFP10586 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPRFP10586 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.07■□□□□ 0.8
PTPRFP10586 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PTPRFP10586 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPRFP10586 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.07■□□□□ 0.8
PTPRFP10586 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PTPRFP10586 AL135999.2-201ENST00000622438 1686 ntBASIC20.07■□□□□ 0.8
PTPRFP10586 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPRFP10586 REXO1L9P-201ENST00000604264 2108 ntBASIC20.06■□□□□ 0.8
PTPRFP10586 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPRFP10586 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPRFP10586 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPRFP10586 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPRFP10586 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPRFP10586 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPRFP10586 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.06■□□□□ 0.8
PTPRFP10586 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPRFP10586 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPRFP10586 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PTPRFP10586 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PTPRFP10586 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PTPRFP10586 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.06■□□□□ 0.8
PTPRFP10586 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPRFP10586 LHX6-205ENST00000464484 666 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPRFP10586 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
PTPRFP10586 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.06■□□□□ 0.8
PTPRFP10586 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.06■□□□□ 0.8
PTPRFP10586 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
PTPRFP10586 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.06■□□□□ 0.8
PTPRFP10586 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms