Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.84■□□□□ 0.61
FAM228BP0C875 AC016396.2-201ENST00000562575 1417 ntBASIC18.84■□□□□ 0.61
FAM228BP0C875 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
FAM228BP0C875 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.84■□□□□ 0.61
FAM228BP0C875 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.84■□□□□ 0.61
FAM228BP0C875 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.84■□□□□ 0.61
FAM228BP0C875 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.84■□□□□ 0.61
FAM228BP0C875 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.84■□□□□ 0.61
FAM228BP0C875 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.84■□□□□ 0.61
FAM228BP0C875 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
FAM228BP0C875 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.84■□□□□ 0.61
FAM228BP0C875 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
FAM228BP0C875 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.84■□□□□ 0.61
FAM228BP0C875 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FAM228BP0C875 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
FAM228BP0C875 LINC01311-201ENST00000565162 1445 ntBASIC18.83■□□□□ 0.61
FAM228BP0C875 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.83■□□□□ 0.61
FAM228BP0C875 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.83■□□□□ 0.61
FAM228BP0C875 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
FAM228BP0C875 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.83■□□□□ 0.61
FAM228BP0C875 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.83■□□□□ 0.61
FAM228BP0C875 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.83■□□□□ 0.6
FAM228BP0C875 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
FAM228BP0C875 VENTXP5-201ENST00000523979 775 ntBASIC18.83■□□□□ 0.6
FAM228BP0C875 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FAM228BP0C875 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.83■□□□□ 0.6
FAM228BP0C875 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.83■□□□□ 0.6
FAM228BP0C875 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
FAM228BP0C875 HYMAI.1-201ENST00000620949 238 ntBASIC18.83■□□□□ 0.6
FAM228BP0C875 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.83■□□□□ 0.6
FAM228BP0C875 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FAM228BP0C875 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
FAM228BP0C875 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
FAM228BP0C875 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
FAM228BP0C875 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FAM228BP0C875 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FAM228BP0C875 AC060834.1-201ENST00000443027 2032 ntBASIC18.83■□□□□ 0.6
FAM228BP0C875 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.83■□□□□ 0.6
FAM228BP0C875 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
FAM228BP0C875 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
FAM228BP0C875 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
FAM228BP0C875 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
FAM228BP0C875 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM228BP0C875 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.82■□□□□ 0.6
FAM228BP0C875 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
FAM228BP0C875 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
FAM228BP0C875 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 AC005521.1-201ENST00000393351 872 ntBASIC18.82■□□□□ 0.6
FAM228BP0C875 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
FAM228BP0C875 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM228BP0C875 AC096633.1-201ENST00000422446 749 ntBASIC18.82■□□□□ 0.6
FAM228BP0C875 TSPY5P-201ENST00000426936 936 ntBASIC18.82■□□□□ 0.6
FAM228BP0C875 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.82■□□□□ 0.6
FAM228BP0C875 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
FAM228BP0C875 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.82■□□□□ 0.6
FAM228BP0C875 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.82■□□□□ 0.6
FAM228BP0C875 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.82■□□□□ 0.6
FAM228BP0C875 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 AC106886.4-201ENST00000623557 2502 ntBASIC18.82■□□□□ 0.6
FAM228BP0C875 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
FAM228BP0C875 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
FAM228BP0C875 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 AC116353.5-201ENST00000638148 1699 ntBASIC18.82■□□□□ 0.6
FAM228BP0C875 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
FAM228BP0C875 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM228BP0C875 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM228BP0C875 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.82■□□□□ 0.6
FAM228BP0C875 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.82■□□□□ 0.6
FAM228BP0C875 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms