Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC175P0C221 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC175P0C221 TSPY17P-201ENST00000450329 467 ntBASIC19.11■□□□□ 0.65
CCDC175P0C221 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC175P0C221 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC175P0C221 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC175P0C221 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC175P0C221 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 AC046158.3-201ENST00000624947 2558 ntBASIC19.11■□□□□ 0.65
CCDC175P0C221 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 FLJ38576-201ENST00000623820 2459 ntBASIC19.11■□□□□ 0.65
CCDC175P0C221 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC175P0C221 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CCDC175P0C221 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC175P0C221 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC175P0C221 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.1■□□□□ 0.65
CCDC175P0C221 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC175P0C221 SLC25A1P2-201ENST00000430693 912 ntBASIC19.1■□□□□ 0.65
CCDC175P0C221 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC175P0C221 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.1■□□□□ 0.65
CCDC175P0C221 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC175P0C221 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC175P0C221 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC175P0C221 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC175P0C221 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
CCDC175P0C221 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC175P0C221 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC175P0C221 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC175P0C221 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC175P0C221 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC175P0C221 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC175P0C221 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC175P0C221 DOC2GP-204ENST00000639052 2548 ntBASIC19.09■□□□□ 0.65
CCDC175P0C221 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC175P0C221 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC175P0C221 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC175P0C221 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC175P0C221 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC175P0C221 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC175P0C221 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CCDC175P0C221 KRT18P29-201ENST00000397031 1267 ntBASIC19.09■□□□□ 0.65
CCDC175P0C221 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC175P0C221 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CCDC175P0C221 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.09■□□□□ 0.65
CCDC175P0C221 AP005242.2-201ENST00000580065 1175 ntBASIC19.09■□□□□ 0.65
CCDC175P0C221 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC175P0C221 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC175P0C221 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC175P0C221 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC175P0C221 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC175P0C221 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CCDC175P0C221 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC175P0C221 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC175P0C221 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC175P0C221 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.08■□□□□ 0.65
CCDC175P0C221 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.08■□□□□ 0.65
CCDC175P0C221 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC175P0C221 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
CCDC175P0C221 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC175P0C221 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.08■□□□□ 0.65
CCDC175P0C221 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CCDC175P0C221 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC175P0C221 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC175P0C221 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.08■□□□□ 0.64
CCDC175P0C221 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.08■□□□□ 0.64
CCDC175P0C221 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC175P0C221 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC175P0C221 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC175P0C221 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC175P0C221 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.08■□□□□ 0.64
CCDC175P0C221 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.08■□□□□ 0.64
CCDC175P0C221 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.08■□□□□ 0.64
CCDC175P0C221 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CCDC175P0C221 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC175P0C221 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms