Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CD48P09326 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.31■□□□□ 0.52
CD48P09326 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CD48P09326 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.31■□□□□ 0.52
CD48P09326 AP005901.3-202ENST00000581653 237 ntBASIC18.31■□□□□ 0.52
CD48P09326 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.31■□□□□ 0.52
CD48P09326 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CD48P09326 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CD48P09326 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.31■□□□□ 0.52
CD48P09326 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CD48P09326 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CD48P09326 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CD48P09326 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD48P09326 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CD48P09326 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 AP001094.4-201ENST00000579008 2176 ntBASIC18.3■□□□□ 0.52
CD48P09326 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CD48P09326 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.3■□□□□ 0.52
CD48P09326 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 COX5BP2-201ENST00000392354 334 ntBASIC18.3■□□□□ 0.52
CD48P09326 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 BX276092.5-203ENST00000456199 560 ntBASIC18.3■□□□□ 0.52
CD48P09326 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.3■□□□□ 0.52
CD48P09326 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 AL138831.2-201ENST00000606564 490 ntBASIC18.3■□□□□ 0.52
CD48P09326 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CD48P09326 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.3■□□□□ 0.52
CD48P09326 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.3■□□□□ 0.52
CD48P09326 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD48P09326 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.3■□□□□ 0.52
CD48P09326 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.29■□□□□ 0.52
CD48P09326 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.29■□□□□ 0.52
CD48P09326 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.29■□□□□ 0.52
CD48P09326 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.29■□□□□ 0.52
CD48P09326 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.29■□□□□ 0.52
CD48P09326 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CD48P09326 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CD48P09326 CHCHD2P8-201ENST00000429873 447 ntBASIC18.29■□□□□ 0.52
CD48P09326 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 KRT18P35-201ENST00000510488 1269 ntBASIC18.29■□□□□ 0.52
CD48P09326 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.29■□□□□ 0.52
CD48P09326 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.29■□□□□ 0.52
CD48P09326 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CD48P09326 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.29■□□□□ 0.52
CD48P09326 AL121672.3-201ENST00000608644 468 ntBASIC18.29■□□□□ 0.52
CD48P09326 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.29■□□□□ 0.52
CD48P09326 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CD48P09326 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD48P09326 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CD48P09326 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.28■□□□□ 0.52
CD48P09326 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 PCDHA12-202ENST00000613593 2588 ntBASIC18.28■□□□□ 0.52
CD48P09326 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 AP002383.4-201ENST00000442518 975 ntBASIC18.28■□□□□ 0.52
CD48P09326 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.28■□□□□ 0.52
CD48P09326 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.28■□□□□ 0.52
CD48P09326 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD48P09326 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms