Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
COL1A2P08123 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
COL1A2P08123 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.29■□□□□ 0.68
COL1A2P08123 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.29■□□□□ 0.68
COL1A2P08123 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
COL1A2P08123 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A2P08123 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A2P08123 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.29■□□□□ 0.68
COL1A2P08123 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A2P08123 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A2P08123 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.29■□□□□ 0.68
COL1A2P08123 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.29■□□□□ 0.68
COL1A2P08123 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.29■□□□□ 0.68
COL1A2P08123 AC064836.3-201ENST00000607928 673 ntBASIC19.29■□□□□ 0.68
COL1A2P08123 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.29■□□□□ 0.68
COL1A2P08123 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
COL1A2P08123 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL1A2P08123 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A2P08123 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
COL1A2P08123 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
COL1A2P08123 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.29■□□□□ 0.68
COL1A2P08123 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A2P08123 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.28■□□□□ 0.68
COL1A2P08123 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A2P08123 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A2P08123 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A2P08123 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.28■□□□□ 0.68
COL1A2P08123 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
COL1A2P08123 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.28■□□□□ 0.68
COL1A2P08123 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A2P08123 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A2P08123 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.28■□□□□ 0.68
COL1A2P08123 AP002414.1-201ENST00000391405 1147 ntBASIC19.28■□□□□ 0.68
COL1A2P08123 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.28■□□□□ 0.68
COL1A2P08123 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.28■□□□□ 0.68
COL1A2P08123 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A2P08123 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.28■□□□□ 0.68
COL1A2P08123 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.28■□□□□ 0.68
COL1A2P08123 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.28■□□□□ 0.68
COL1A2P08123 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.28■□□□□ 0.68
COL1A2P08123 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A2P08123 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.28■□□□□ 0.68
COL1A2P08123 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A2P08123 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.28■□□□□ 0.68
COL1A2P08123 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL1A2P08123 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
COL1A2P08123 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A2P08123 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
COL1A2P08123 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A2P08123 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
COL1A2P08123 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A2P08123 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A2P08123 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.27■□□□□ 0.68
COL1A2P08123 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A2P08123 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
COL1A2P08123 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A2P08123 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A2P08123 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.27■□□□□ 0.68
COL1A2P08123 PRSS29P-201ENST00000440800 595 ntBASIC19.27■□□□□ 0.68
COL1A2P08123 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.27■□□□□ 0.68
COL1A2P08123 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.27■□□□□ 0.68
COL1A2P08123 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.27■□□□□ 0.68
COL1A2P08123 AL139327.4-201ENST00000612362 153 ntBASIC19.27■□□□□ 0.68
COL1A2P08123 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL1A2P08123 AC139530.3-201ENST00000620344 690 ntBASIC19.27■□□□□ 0.68
COL1A2P08123 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
COL1A2P08123 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL1A2P08123 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.27■□□□□ 0.67
COL1A2P08123 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
COL1A2P08123 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
COL1A2P08123 AC046185.3-201ENST00000623228 1824 ntBASIC19.27■□□□□ 0.67
COL1A2P08123 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.27■□□□□ 0.67
COL1A2P08123 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.26■□□□□ 0.67
COL1A2P08123 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
COL1A2P08123 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.26■□□□□ 0.67
COL1A2P08123 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
COL1A2P08123 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.26■□□□□ 0.67
COL1A2P08123 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL1A2P08123 CRYGEP-201ENST00000412192 528 ntBASIC19.26■□□□□ 0.67
COL1A2P08123 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.26■□□□□ 0.67
COL1A2P08123 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.26■□□□□ 0.67
COL1A2P08123 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.26■□□□□ 0.67
COL1A2P08123 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms