Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.7□□□□□ -0.06
CTSDP07339 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CTSDP07339 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.69□□□□□ -0.06
CTSDP07339 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CTSDP07339 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CTSDP07339 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CTSDP07339 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.69□□□□□ -0.06
CTSDP07339 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
CTSDP07339 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.69□□□□□ -0.06
CTSDP07339 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CTSDP07339 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.69□□□□□ -0.06
CTSDP07339 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CTSDP07339 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CTSDP07339 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.69□□□□□ -0.06
CTSDP07339 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 AL023803.3-201ENST00000615559 522 ntBASIC14.69□□□□□ -0.06
CTSDP07339 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.69□□□□□ -0.06
CTSDP07339 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.69□□□□□ -0.06
CTSDP07339 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.69□□□□□ -0.06
CTSDP07339 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTSDP07339 AC011270.2-201ENST00000624293 2550 ntBASIC14.69□□□□□ -0.06
CTSDP07339 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.68□□□□□ -0.06
CTSDP07339 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.68□□□□□ -0.06
CTSDP07339 DOC2GP-204ENST00000639052 2548 ntBASIC14.68□□□□□ -0.06
CTSDP07339 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CTSDP07339 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
CTSDP07339 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CTSDP07339 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC14.68□□□□□ -0.06
CTSDP07339 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.68□□□□□ -0.06
CTSDP07339 SLC25A1P2-201ENST00000430693 912 ntBASIC14.68□□□□□ -0.06
CTSDP07339 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CTSDP07339 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.68□□□□□ -0.06
CTSDP07339 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.68□□□□□ -0.06
CTSDP07339 AL355355.2-201ENST00000442321 338 ntBASIC14.68□□□□□ -0.06
CTSDP07339 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.68□□□□□ -0.06
CTSDP07339 AC098590.1-201ENST00000468126 897 ntBASIC14.68□□□□□ -0.06
CTSDP07339 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.68□□□□□ -0.06
CTSDP07339 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.68□□□□□ -0.06
CTSDP07339 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.68□□□□□ -0.06
CTSDP07339 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.68□□□□□ -0.06
CTSDP07339 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CTSDP07339 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.68□□□□□ -0.06
CTSDP07339 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CTSDP07339 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.68□□□□□ -0.06
CTSDP07339 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CTSDP07339 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTSDP07339 AC046158.3-201ENST00000624947 2558 ntBASIC14.68□□□□□ -0.06
CTSDP07339 LYSMD4-203ENST00000378904 2122 ntBASIC14.68□□□□□ -0.06
CTSDP07339 AC116353.5-201ENST00000638148 1699 ntBASIC14.68□□□□□ -0.06
CTSDP07339 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CTSDP07339 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CTSDP07339 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CTSDP07339 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms