Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHGBP05060 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.2■□□□□ 0.99
CHGBP05060 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.2■□□□□ 0.98
CHGBP05060 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC21.2■□□□□ 0.98
CHGBP05060 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 HNRNPDP1-201ENST00000439535 754 ntBASIC21.2■□□□□ 0.98
CHGBP05060 BX005266.1-201ENST00000473402 457 ntBASIC21.2■□□□□ 0.98
CHGBP05060 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CHGBP05060 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
CHGBP05060 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CHGBP05060 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC21.2■□□□□ 0.98
CHGBP05060 AC073592.5-201ENST00000624854 528 ntBASIC21.2■□□□□ 0.98
CHGBP05060 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.2■□□□□ 0.98
CHGBP05060 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.2■□□□□ 0.98
CHGBP05060 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CHGBP05060 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CHGBP05060 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.2■□□□□ 0.98
CHGBP05060 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC21.2■□□□□ 0.98
CHGBP05060 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHGBP05060 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.19■□□□□ 0.98
CHGBP05060 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGBP05060 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGBP05060 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.19■□□□□ 0.98
CHGBP05060 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHGBP05060 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGBP05060 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CHGBP05060 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHGBP05060 AC026396.1-201ENST00000419388 421 ntBASIC21.19■□□□□ 0.98
CHGBP05060 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.19■□□□□ 0.98
CHGBP05060 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CHGBP05060 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.19■□□□□ 0.98
CHGBP05060 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHGBP05060 NKAPP1-205ENST00000585790 367 ntBASIC21.19■□□□□ 0.98
CHGBP05060 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.19■□□□□ 0.98
CHGBP05060 AL049840.3-201ENST00000602669 611 ntBASIC21.19■□□□□ 0.98
CHGBP05060 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGBP05060 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CHGBP05060 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.19■□□□□ 0.98
CHGBP05060 FUT8-AS1-201ENST00000621019 1521 ntBASIC21.19■□□□□ 0.98
CHGBP05060 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGBP05060 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHGBP05060 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
CHGBP05060 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CHGBP05060 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHGBP05060 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHGBP05060 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.18■□□□□ 0.98
CHGBP05060 AC005104.2-201ENST00000427818 678 ntBASIC21.18■□□□□ 0.98
CHGBP05060 TPM4P1-201ENST00000436100 807 ntBASIC21.18■□□□□ 0.98
CHGBP05060 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.18■□□□□ 0.98
CHGBP05060 FDX1P1-201ENST00000449115 551 ntBASIC21.18■□□□□ 0.98
CHGBP05060 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHGBP05060 RNA5SP419-201ENST00000515908 135 ntBASIC21.18■□□□□ 0.98
CHGBP05060 SLC25A6P4-201ENST00000586535 553 ntBASIC21.18■□□□□ 0.98
CHGBP05060 CALM3-211ENST00000598871 561 ntTSL 4 BASIC21.18■□□□□ 0.98
CHGBP05060 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHGBP05060 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CHGBP05060 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHGBP05060 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHGBP05060 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.18■□□□□ 0.98
CHGBP05060 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHGBP05060 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHGBP05060 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHGBP05060 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHGBP05060 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHGBP05060 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.17■□□□□ 0.98
CHGBP05060 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHGBP05060 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHGBP05060 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC21.17■□□□□ 0.98
CHGBP05060 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CHGBP05060 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.17■□□□□ 0.98
CHGBP05060 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHGBP05060 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CHGBP05060 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC21.17■□□□□ 0.98
CHGBP05060 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.17■□□□□ 0.98
CHGBP05060 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CHGBP05060 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.17■□□□□ 0.98
CHGBP05060 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.17■□□□□ 0.98
CHGBP05060 AL160237.2-201ENST00000556165 472 ntBASIC21.17■□□□□ 0.98
CHGBP05060 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.17■□□□□ 0.98
CHGBP05060 AC021087.4-201ENST00000563761 564 ntBASIC21.17■□□□□ 0.98
CHGBP05060 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CHGBP05060 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.17■□□□□ 0.98
CHGBP05060 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHGBP05060 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC21.17■□□□□ 0.98
CHGBP05060 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHGBP05060 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CHGBP05060 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHGBP05060 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.17■□□□□ 0.98
CHGBP05060 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms