Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CD74P04233 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.87□□□□□ -0.03
CD74P04233 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD74P04233 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CD74P04233 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CD74P04233 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.87□□□□□ -0.03
CD74P04233 AC116562.2-201ENST00000507042 360 ntBASIC14.87□□□□□ -0.03
CD74P04233 RNA5SP413-201ENST00000516373 109 ntBASIC14.87□□□□□ -0.03
CD74P04233 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.87□□□□□ -0.03
CD74P04233 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
CD74P04233 PCDHA1-201ENST00000378133 2726 ntBASIC14.87□□□□□ -0.03
CD74P04233 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.87□□□□□ -0.03
CD74P04233 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD74P04233 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CD74P04233 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.87□□□□□ -0.03
CD74P04233 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.87□□□□□ -0.03
CD74P04233 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.87□□□□□ -0.03
CD74P04233 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CD74P04233 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.86□□□□□ -0.03
CD74P04233 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.86□□□□□ -0.03
CD74P04233 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.86□□□□□ -0.03
CD74P04233 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CD74P04233 AC006449.5-201ENST00000610658 2098 ntBASIC14.86□□□□□ -0.03
CD74P04233 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.86□□□□□ -0.03
CD74P04233 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
CD74P04233 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD74P04233 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.86□□□□□ -0.03
CD74P04233 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.86□□□□□ -0.03
CD74P04233 KRT18P29-201ENST00000397031 1267 ntBASIC14.86□□□□□ -0.03
CD74P04233 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CD74P04233 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 AL355355.2-201ENST00000442321 338 ntBASIC14.86□□□□□ -0.03
CD74P04233 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.86□□□□□ -0.03
CD74P04233 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.86□□□□□ -0.03
CD74P04233 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 AC097488.1-201ENST00000507834 756 ntBASIC14.86□□□□□ -0.03
CD74P04233 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.86□□□□□ -0.03
CD74P04233 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.86□□□□□ -0.03
CD74P04233 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC14.86□□□□□ -0.03
CD74P04233 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CD74P04233 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.86□□□□□ -0.03
CD74P04233 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.86□□□□□ -0.03
CD74P04233 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CD74P04233 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
CD74P04233 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.86□□□□□ -0.03
CD74P04233 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CD74P04233 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.86□□□□□ -0.03
CD74P04233 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.86□□□□□ -0.03
CD74P04233 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CD74P04233 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.86□□□□□ -0.03
CD74P04233 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CD74P04233 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.85□□□□□ -0.03
CD74P04233 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 AC103702.1-201ENST00000548801 2630 ntBASIC14.85□□□□□ -0.03
CD74P04233 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.85□□□□□ -0.03
CD74P04233 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CD74P04233 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CD74P04233 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms