Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 PAWRP1-201ENST00000451083 565 ntBASIC19.84■□□□□ 0.77
HMGCRP04035 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCRP04035 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGCRP04035 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCRP04035 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.84■□□□□ 0.77
HMGCRP04035 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCRP04035 AC105339.1-204ENST00000636249 355 ntBASIC19.84■□□□□ 0.77
HMGCRP04035 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCRP04035 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCRP04035 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCRP04035 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCRP04035 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCRP04035 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCRP04035 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCRP04035 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.84■□□□□ 0.77
HMGCRP04035 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HMGCRP04035 AL020996.1-203ENST00000536896 2307 ntBASIC19.84■□□□□ 0.77
HMGCRP04035 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
HMGCRP04035 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCRP04035 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCRP04035 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCRP04035 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCRP04035 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCRP04035 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCRP04035 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCRP04035 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
HMGCRP04035 ANO7L1-203ENST00000602586 1720 ntBASIC19.83■□□□□ 0.77
HMGCRP04035 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCRP04035 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
HMGCRP04035 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCRP04035 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HMGCRP04035 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.83■□□□□ 0.77
HMGCRP04035 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.83■□□□□ 0.77
HMGCRP04035 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
HMGCRP04035 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.83■□□□□ 0.77
HMGCRP04035 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.83■□□□□ 0.77
HMGCRP04035 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
HMGCRP04035 AC138761.1-201ENST00000584393 385 ntBASIC19.83■□□□□ 0.77
HMGCRP04035 AC005498.2-205ENST00000593218 784 ntBASIC19.83■□□□□ 0.77
HMGCRP04035 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.83■□□□□ 0.76
HMGCRP04035 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.83■□□□□ 0.76
HMGCRP04035 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCRP04035 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.83■□□□□ 0.76
HMGCRP04035 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCRP04035 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCRP04035 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCRP04035 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HMGCRP04035 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.83■□□□□ 0.76
HMGCRP04035 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCRP04035 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGCRP04035 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCRP04035 AL138781.2-201ENST00000617896 1843 ntBASIC19.82■□□□□ 0.76
HMGCRP04035 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCRP04035 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCRP04035 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCRP04035 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCRP04035 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGCRP04035 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.82■□□□□ 0.76
HMGCRP04035 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.82■□□□□ 0.76
HMGCRP04035 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.82■□□□□ 0.76
HMGCRP04035 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.82■□□□□ 0.76
HMGCRP04035 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.82■□□□□ 0.76
HMGCRP04035 MIR4745-201ENST00000577608 62 ntBASIC19.82■□□□□ 0.76
HMGCRP04035 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.82■□□□□ 0.76
HMGCRP04035 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.82■□□□□ 0.76
HMGCRP04035 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.82■□□□□ 0.76
HMGCRP04035 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCRP04035 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCRP04035 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.82■□□□□ 0.76
HMGCRP04035 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCRP04035 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.82■□□□□ 0.76
HMGCRP04035 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCRP04035 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
HMGCRP04035 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
HMGCRP04035 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HMGCRP04035 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCRP04035 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGCRP04035 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
HMGCRP04035 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
HMGCRP04035 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCRP04035 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.81■□□□□ 0.76
HMGCRP04035 AC093010.1-201ENST00000473625 1624 ntBASIC19.81■□□□□ 0.76
HMGCRP04035 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGCRP04035 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCRP04035 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCRP04035 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGCRP04035 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGCRP04035 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.81■□□□□ 0.76
HMGCRP04035 AC023141.5-201ENST00000458585 616 ntBASIC19.81■□□□□ 0.76
HMGCRP04035 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGCRP04035 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.81■□□□□ 0.76
HMGCRP04035 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCRP04035 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
HMGCRP04035 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCRP04035 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HMGCRP04035 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCRP04035 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
HMGCRP04035 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.81■□□□□ 0.76
HMGCRP04035 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
HMGCRP04035 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms