Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.81■□□□□ 0.76
GGPS1O95749 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.81■□□□□ 0.76
GGPS1O95749 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GGPS1O95749 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
GGPS1O95749 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
GGPS1O95749 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
GGPS1O95749 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.8■□□□□ 0.76
GGPS1O95749 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.8■□□□□ 0.76
GGPS1O95749 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.8■□□□□ 0.76
GGPS1O95749 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
GGPS1O95749 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.8■□□□□ 0.76
GGPS1O95749 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
GGPS1O95749 UNC93B6-202ENST00000528242 690 ntBASIC19.8■□□□□ 0.76
GGPS1O95749 AC109462.3-201ENST00000573934 613 ntBASIC19.8■□□□□ 0.76
GGPS1O95749 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.8■□□□□ 0.76
GGPS1O95749 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.8■□□□□ 0.76
GGPS1O95749 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.8■□□□□ 0.76
GGPS1O95749 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
GGPS1O95749 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.8■□□□□ 0.76
GGPS1O95749 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.8■□□□□ 0.76
GGPS1O95749 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.8■□□□□ 0.76
GGPS1O95749 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 AC148477.5-201ENST00000625164 1645 ntBASIC19.8■□□□□ 0.76
GGPS1O95749 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GGPS1O95749 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.8■□□□□ 0.76
GGPS1O95749 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.8■□□□□ 0.76
GGPS1O95749 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
GGPS1O95749 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GGPS1O95749 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.79■□□□□ 0.76
GGPS1O95749 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 NOC2LP1-202ENST00000452600 2235 ntBASIC19.79■□□□□ 0.76
GGPS1O95749 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.79■□□□□ 0.76
GGPS1O95749 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
GGPS1O95749 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
GGPS1O95749 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GGPS1O95749 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 KRT18P13-201ENST00000400056 1290 ntBASIC19.79■□□□□ 0.76
GGPS1O95749 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.79■□□□□ 0.76
GGPS1O95749 KRT18P27-201ENST00000427733 1299 ntBASIC19.79■□□□□ 0.76
GGPS1O95749 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.79■□□□□ 0.76
GGPS1O95749 DDX43P3-201ENST00000441064 443 ntBASIC19.79■□□□□ 0.76
GGPS1O95749 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.79■□□□□ 0.76
GGPS1O95749 AC006557.2-201ENST00000592985 1240 ntBASIC19.79■□□□□ 0.76
GGPS1O95749 AL356488.2-201ENST00000602755 427 ntBASIC19.79■□□□□ 0.76
GGPS1O95749 AC140113.2-201ENST00000604370 208 ntBASIC19.79■□□□□ 0.76
GGPS1O95749 AC027601.4-201ENST00000611259 610 ntBASIC19.79■□□□□ 0.76
GGPS1O95749 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.79■□□□□ 0.76
GGPS1O95749 BX276092.7-203ENST00000637198 1536 ntBASIC19.79■□□□□ 0.76
GGPS1O95749 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
GGPS1O95749 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
GGPS1O95749 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
GGPS1O95749 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.79■□□□□ 0.76
GGPS1O95749 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GGPS1O95749 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GGPS1O95749 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GGPS1O95749 AC020763.4-201ENST00000623414 4170 ntBASIC19.78■□□□□ 0.76
GGPS1O95749 AC026471.1-201ENST00000564629 3026 ntBASIC19.78■□□□□ 0.76
GGPS1O95749 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GGPS1O95749 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.78■□□□□ 0.76
GGPS1O95749 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GGPS1O95749 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GGPS1O95749 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.78■□□□□ 0.76
GGPS1O95749 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GGPS1O95749 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GGPS1O95749 KLF4P1-201ENST00000412782 1185 ntBASIC19.78■□□□□ 0.76
GGPS1O95749 MED15P5-201ENST00000423150 992 ntBASIC19.78■□□□□ 0.76
GGPS1O95749 AC092865.5-201ENST00000545435 363 ntBASIC19.78■□□□□ 0.76
GGPS1O95749 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.78■□□□□ 0.76
GGPS1O95749 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
GGPS1O95749 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.78■□□□□ 0.76
GGPS1O95749 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GGPS1O95749 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GGPS1O95749 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GGPS1O95749 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
GGPS1O95749 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms