Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX4O95219 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX4O95219 RNF126P1-202ENST00000569893 925 ntBASIC16.65■□□□□ 0.26
SNX4O95219 AC090616.6-201ENST00000582640 721 ntBASIC16.65■□□□□ 0.26
SNX4O95219 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SNX4O95219 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.65■□□□□ 0.26
SNX4O95219 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.65■□□□□ 0.26
SNX4O95219 AC080080.1-201ENST00000625121 2420 ntBASIC16.65■□□□□ 0.26
SNX4O95219 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNX4O95219 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SNX4O95219 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
SNX4O95219 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SNX4O95219 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX4O95219 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX4O95219 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX4O95219 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SNX4O95219 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX4O95219 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
SNX4O95219 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNX4O95219 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX4O95219 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX4O95219 ATP5G2P1-201ENST00000433580 426 ntBASIC16.64■□□□□ 0.25
SNX4O95219 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNX4O95219 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.64■□□□□ 0.25
SNX4O95219 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX4O95219 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX4O95219 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.64■□□□□ 0.25
SNX4O95219 AC093458.2-201ENST00000623150 629 ntBASIC16.64■□□□□ 0.25
SNX4O95219 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.64■□□□□ 0.25
SNX4O95219 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.64■□□□□ 0.25
SNX4O95219 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SNX4O95219 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SNX4O95219 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNX4O95219 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX4O95219 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX4O95219 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.64■□□□□ 0.25
SNX4O95219 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNX4O95219 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNX4O95219 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SNX4O95219 GMCL1P1-201ENST00000463439 1581 ntBASIC16.64■□□□□ 0.25
SNX4O95219 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SNX4O95219 AC016734.2-201ENST00000624325 1377 ntBASIC16.64■□□□□ 0.25
SNX4O95219 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.63■□□□□ 0.25
SNX4O95219 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SNX4O95219 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SNX4O95219 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SNX4O95219 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.63■□□□□ 0.25
SNX4O95219 AL024508.2-201ENST00000607749 1894 ntBASIC16.63■□□□□ 0.25
SNX4O95219 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SNX4O95219 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SNX4O95219 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SNX4O95219 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SNX4O95219 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.63■□□□□ 0.25
SNX4O95219 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SNX4O95219 CHCHD2P8-201ENST00000429873 447 ntBASIC16.63■□□□□ 0.25
SNX4O95219 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.63■□□□□ 0.25
SNX4O95219 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.63■□□□□ 0.25
SNX4O95219 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.63■□□□□ 0.25
SNX4O95219 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.63■□□□□ 0.25
SNX4O95219 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
SNX4O95219 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.63■□□□□ 0.25
SNX4O95219 AL353692.3-201ENST00000407031 1396 ntBASIC16.63■□□□□ 0.25
SNX4O95219 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNX4O95219 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SNX4O95219 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SNX4O95219 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SNX4O95219 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.62■□□□□ 0.25
SNX4O95219 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX4O95219 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX4O95219 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX4O95219 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX4O95219 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX4O95219 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.62■□□□□ 0.25
SNX4O95219 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNX4O95219 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.62■□□□□ 0.25
SNX4O95219 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms