Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF40O75150 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RNF40O75150 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF40O75150 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF40O75150 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF40O75150 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.1■□□□□ 0.65
RNF40O75150 AC111152.3-201ENST00000569699 673 ntBASIC19.1■□□□□ 0.65
RNF40O75150 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RNF40O75150 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.1■□□□□ 0.65
RNF40O75150 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.1■□□□□ 0.65
RNF40O75150 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF40O75150 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.1■□□□□ 0.65
RNF40O75150 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 AP001094.4-201ENST00000579008 2176 ntBASIC19.1■□□□□ 0.65
RNF40O75150 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RNF40O75150 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RNF40O75150 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF40O75150 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RNF40O75150 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RNF40O75150 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RNF40O75150 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
RNF40O75150 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
RNF40O75150 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
RNF40O75150 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF40O75150 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF40O75150 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.09■□□□□ 0.65
RNF40O75150 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RNF40O75150 AL845331.1-201ENST00000424978 1190 ntBASIC19.09■□□□□ 0.65
RNF40O75150 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 KRT8P26-201ENST00000534154 1276 ntBASIC19.09■□□□□ 0.65
RNF40O75150 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF40O75150 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 AC112497.1-201ENST00000624824 639 ntBASIC19.09■□□□□ 0.65
RNF40O75150 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
RNF40O75150 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF40O75150 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF40O75150 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.09■□□□□ 0.65
RNF40O75150 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.09■□□□□ 0.65
RNF40O75150 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RNF40O75150 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.08■□□□□ 0.65
RNF40O75150 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF40O75150 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
RNF40O75150 HEIH-201ENST00000623091 1652 ntBASIC19.08■□□□□ 0.65
RNF40O75150 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF40O75150 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF40O75150 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.08■□□□□ 0.65
RNF40O75150 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
RNF40O75150 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.08■□□□□ 0.65
RNF40O75150 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RNF40O75150 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
RNF40O75150 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF40O75150 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF40O75150 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RNF40O75150 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF40O75150 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RNF40O75150 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
RNF40O75150 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.08■□□□□ 0.64
RNF40O75150 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.08■□□□□ 0.64
RNF40O75150 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF40O75150 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
RNF40O75150 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.08■□□□□ 0.64
RNF40O75150 AL136038.4-201ENST00000603606 1261 ntBASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms