Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
GMDSO60547 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
GMDSO60547 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.69■□□□□ 0.1
GMDSO60547 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 AC073508.3-201ENST00000619697 1419 ntBASIC15.69■□□□□ 0.1
GMDSO60547 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.69■□□□□ 0.1
GMDSO60547 UBALD1-205ENST00000590891 2641 ntBASIC15.69■□□□□ 0.1
GMDSO60547 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
GMDSO60547 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
GMDSO60547 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.69■□□□□ 0.1
GMDSO60547 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 AC005521.1-201ENST00000393351 872 ntBASIC15.69■□□□□ 0.1
GMDSO60547 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.69■□□□□ 0.1
GMDSO60547 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.69■□□□□ 0.1
GMDSO60547 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.69■□□□□ 0.1
GMDSO60547 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.69■□□□□ 0.1
GMDSO60547 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 CICP6-201ENST00000457191 2729 ntBASIC15.69■□□□□ 0.1
GMDSO60547 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.69■□□□□ 0.1
GMDSO60547 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.69■□□□□ 0.1
GMDSO60547 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GMDSO60547 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
GMDSO60547 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.68■□□□□ 0.1
GMDSO60547 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GMDSO60547 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.68■□□□□ 0.1
GMDSO60547 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.68■□□□□ 0.1
GMDSO60547 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GMDSO60547 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.68■□□□□ 0.1
GMDSO60547 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.68■□□□□ 0.1
GMDSO60547 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 MIR3917-201ENST00000580971 93 ntBASIC15.68■□□□□ 0.1
GMDSO60547 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GMDSO60547 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GMDSO60547 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.68■□□□□ 0.1
GMDSO60547 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GMDSO60547 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.68■□□□□ 0.1
GMDSO60547 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.68■□□□□ 0.1
GMDSO60547 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GMDSO60547 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.67■□□□□ 0.1
GMDSO60547 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.67■□□□□ 0.1
GMDSO60547 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.67■□□□□ 0.1
GMDSO60547 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.67■□□□□ 0.1
GMDSO60547 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.67■□□□□ 0.1
GMDSO60547 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.67■□□□□ 0.1
GMDSO60547 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.67■□□□□ 0.1
GMDSO60547 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GMDSO60547 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms