Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AL008721.1-201ENST00000609964 604 ntBASIC16.68■□□□□ 0.26
URB1O60287 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
URB1O60287 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.68■□□□□ 0.26
URB1O60287 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
URB1O60287 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.68■□□□□ 0.26
URB1O60287 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.68■□□□□ 0.26
URB1O60287 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
URB1O60287 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.68■□□□□ 0.26
URB1O60287 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.68■□□□□ 0.26
URB1O60287 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
URB1O60287 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
URB1O60287 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.68■□□□□ 0.26
URB1O60287 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.68■□□□□ 0.26
URB1O60287 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.68■□□□□ 0.26
URB1O60287 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.68■□□□□ 0.26
URB1O60287 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.68■□□□□ 0.26
URB1O60287 AC004877.2-201ENST00000623941 599 ntBASIC16.68■□□□□ 0.26
URB1O60287 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.68■□□□□ 0.26
URB1O60287 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
URB1O60287 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
URB1O60287 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
URB1O60287 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
URB1O60287 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.68■□□□□ 0.26
URB1O60287 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.68■□□□□ 0.26
URB1O60287 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
URB1O60287 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
URB1O60287 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
URB1O60287 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
URB1O60287 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
URB1O60287 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
URB1O60287 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
URB1O60287 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
URB1O60287 SDHAP2-201ENST00000455183 2001 ntBASIC16.67■□□□□ 0.26
URB1O60287 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.67■□□□□ 0.26
URB1O60287 MIR4745-201ENST00000577608 62 ntBASIC16.67■□□□□ 0.26
URB1O60287 AC073592.4-201ENST00000623827 446 ntBASIC16.67■□□□□ 0.26
URB1O60287 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.67■□□□□ 0.26
URB1O60287 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.67■□□□□ 0.26
URB1O60287 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.67■□□□□ 0.26
URB1O60287 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
URB1O60287 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
URB1O60287 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
URB1O60287 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
URB1O60287 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
URB1O60287 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.67■□□□□ 0.26
URB1O60287 AC023141.5-201ENST00000458585 616 ntBASIC16.67■□□□□ 0.26
URB1O60287 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.67■□□□□ 0.26
URB1O60287 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.67■□□□□ 0.26
URB1O60287 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.67■□□□□ 0.26
URB1O60287 AC112698.1-201ENST00000510299 916 ntBASIC16.67■□□□□ 0.26
URB1O60287 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.67■□□□□ 0.26
URB1O60287 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.67■□□□□ 0.26
URB1O60287 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.67■□□□□ 0.26
URB1O60287 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.67■□□□□ 0.26
URB1O60287 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
URB1O60287 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
URB1O60287 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
URB1O60287 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
URB1O60287 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.66■□□□□ 0.26
URB1O60287 KRT18P65-201ENST00000439811 1286 ntBASIC16.66■□□□□ 0.26
URB1O60287 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.66■□□□□ 0.26
URB1O60287 RN7SL204P-201ENST00000582831 262 ntBASIC16.66■□□□□ 0.26
URB1O60287 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
URB1O60287 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
URB1O60287 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
URB1O60287 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
URB1O60287 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.66■□□□□ 0.26
URB1O60287 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.66■□□□□ 0.26
URB1O60287 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
URB1O60287 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
URB1O60287 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
URB1O60287 MIR149-201ENST00000384879 89 ntBASIC16.66■□□□□ 0.26
URB1O60287 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.66■□□□□ 0.26
URB1O60287 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms