Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AL355312.1-201ENST00000407115 2176 ntBASIC16.96■□□□□ 0.31
PRICKLE3O43900 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.96■□□□□ 0.31
PRICKLE3O43900 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PRICKLE3O43900 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRICKLE3O43900 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRICKLE3O43900 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PRICKLE3O43900 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
PRICKLE3O43900 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.3
PRICKLE3O43900 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.96■□□□□ 0.3
PRICKLE3O43900 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.96■□□□□ 0.3
PRICKLE3O43900 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 AC132938.5-201ENST00000624980 1813 ntBASIC16.95■□□□□ 0.3
PRICKLE3O43900 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 AC018470.1-201ENST00000624790 3129 ntBASIC16.95■□□□□ 0.3
PRICKLE3O43900 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRICKLE3O43900 GNAS-203ENST00000306120 1878 ntBASIC16.95■□□□□ 0.3
PRICKLE3O43900 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.95■□□□□ 0.3
PRICKLE3O43900 AC067852.2-201ENST00000590513 2313 ntBASIC16.95■□□□□ 0.3
PRICKLE3O43900 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 AC133963.1-201ENST00000504166 1679 ntBASIC16.94■□□□□ 0.3
PRICKLE3O43900 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 FGFR3P6-201ENST00000457012 610 ntBASIC16.94■□□□□ 0.3
PRICKLE3O43900 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 STK25P1-201ENST00000585406 838 ntBASIC16.94■□□□□ 0.3
PRICKLE3O43900 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 HLA-J-201ENST00000462773 1622 ntBASIC16.94■□□□□ 0.3
PRICKLE3O43900 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.94■□□□□ 0.3
PRICKLE3O43900 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRICKLE3O43900 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRICKLE3O43900 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.93■□□□□ 0.3
PRICKLE3O43900 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRICKLE3O43900 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRICKLE3O43900 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PRICKLE3O43900 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRICKLE3O43900 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRICKLE3O43900 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.93■□□□□ 0.3
PRICKLE3O43900 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.93■□□□□ 0.3
PRICKLE3O43900 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.93■□□□□ 0.3
PRICKLE3O43900 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.93■□□□□ 0.3
PRICKLE3O43900 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.93■□□□□ 0.3
PRICKLE3O43900 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRICKLE3O43900 AC104692.2-201ENST00000603054 253 ntBASIC16.93■□□□□ 0.3
PRICKLE3O43900 AC073592.4-201ENST00000623827 446 ntBASIC16.93■□□□□ 0.3
PRICKLE3O43900 AC073592.5-201ENST00000624854 528 ntBASIC16.93■□□□□ 0.3
PRICKLE3O43900 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.93■□□□□ 0.3
PRICKLE3O43900 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRICKLE3O43900 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRICKLE3O43900 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms