Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUX1O43812 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUX1O43812 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
DUX1O43812 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
DUX1O43812 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.9■□□□□ 0.3
DUX1O43812 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
DUX1O43812 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
DUX1O43812 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.9■□□□□ 0.3
DUX1O43812 AC148477.5-201ENST00000625164 1645 ntBASIC16.9■□□□□ 0.3
DUX1O43812 MYCLP1-201ENST00000372451 1075 ntBASIC16.9■□□□□ 0.3
DUX1O43812 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DUX1O43812 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.9■□□□□ 0.3
DUX1O43812 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.9■□□□□ 0.3
DUX1O43812 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.9■□□□□ 0.3
DUX1O43812 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.9■□□□□ 0.3
DUX1O43812 AC002558.1-201ENST00000488906 803 ntBASIC16.9■□□□□ 0.3
DUX1O43812 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
DUX1O43812 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
DUX1O43812 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.9■□□□□ 0.3
DUX1O43812 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
DUX1O43812 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
DUX1O43812 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.9■□□□□ 0.3
DUX1O43812 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUX1O43812 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
DUX1O43812 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
DUX1O43812 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
DUX1O43812 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
DUX1O43812 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
DUX1O43812 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
DUX1O43812 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
DUX1O43812 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
DUX1O43812 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
DUX1O43812 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
DUX1O43812 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
DUX1O43812 AC004408.2-201ENST00000623613 2777 ntBASIC16.89■□□□□ 0.3
DUX1O43812 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
DUX1O43812 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.89■□□□□ 0.29
DUX1O43812 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 RNA5SP416-201ENST00000516838 111 ntBASIC16.89■□□□□ 0.29
DUX1O43812 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.89■□□□□ 0.29
DUX1O43812 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.89■□□□□ 0.29
DUX1O43812 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.89■□□□□ 0.29
DUX1O43812 STK25P1-201ENST00000585406 838 ntBASIC16.89■□□□□ 0.29
DUX1O43812 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
DUX1O43812 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.89■□□□□ 0.29
DUX1O43812 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
DUX1O43812 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.89■□□□□ 0.29
DUX1O43812 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.89■□□□□ 0.29
DUX1O43812 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
DUX1O43812 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 KRT18P55-202ENST00000578578 1546 ntBASIC16.89■□□□□ 0.29
DUX1O43812 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.89■□□□□ 0.29
DUX1O43812 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.89■□□□□ 0.29
DUX1O43812 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
DUX1O43812 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
DUX1O43812 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
DUX1O43812 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.89■□□□□ 0.29
DUX1O43812 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
DUX1O43812 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.89■□□□□ 0.29
DUX1O43812 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
DUX1O43812 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.88■□□□□ 0.29
DUX1O43812 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.88■□□□□ 0.29
DUX1O43812 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
DUX1O43812 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.88■□□□□ 0.29
DUX1O43812 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.88■□□□□ 0.29
DUX1O43812 AC073621.1-201ENST00000392730 636 ntBASIC16.88■□□□□ 0.29
DUX1O43812 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.88■□□□□ 0.29
DUX1O43812 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.88■□□□□ 0.29
DUX1O43812 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.88■□□□□ 0.29
DUX1O43812 KRT18P3-201ENST00000451602 1288 ntBASIC16.88■□□□□ 0.29
DUX1O43812 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.88■□□□□ 0.29
DUX1O43812 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
DUX1O43812 AC004706.3-202ENST00000621574 984 ntBASIC16.88■□□□□ 0.29
DUX1O43812 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
DUX1O43812 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
DUX1O43812 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms