Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SRGAP3O43295 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SRGAP3O43295 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.92■■□□□ 1.1
SRGAP3O43295 PMPCAP1-201ENST00000508114 1576 ntBASIC21.92■■□□□ 1.1
SRGAP3O43295 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.92■■□□□ 1.1
SRGAP3O43295 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SRGAP3O43295 AL353593.2-201ENST00000602529 1483 ntBASIC21.92■■□□□ 1.1
SRGAP3O43295 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SRGAP3O43295 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.92■■□□□ 1.1
SRGAP3O43295 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.92■■□□□ 1.1
SRGAP3O43295 AC004870.1-201ENST00000315132 882 ntBASIC21.92■■□□□ 1.1
SRGAP3O43295 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SRGAP3O43295 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.92■■□□□ 1.1
SRGAP3O43295 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.92■■□□□ 1.1
SRGAP3O43295 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SRGAP3O43295 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SRGAP3O43295 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.92■■□□□ 1.1
SRGAP3O43295 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SRGAP3O43295 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
SRGAP3O43295 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.92■■□□□ 1.1
SRGAP3O43295 GNAS-203ENST00000306120 1878 ntBASIC21.92■■□□□ 1.1
SRGAP3O43295 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SRGAP3O43295 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SRGAP3O43295 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SRGAP3O43295 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SRGAP3O43295 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SRGAP3O43295 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
SRGAP3O43295 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.91■■□□□ 1.1
SRGAP3O43295 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
SRGAP3O43295 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SRGAP3O43295 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SRGAP3O43295 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.91■■□□□ 1.1
SRGAP3O43295 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.91■■□□□ 1.1
SRGAP3O43295 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.91■■□□□ 1.1
SRGAP3O43295 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SRGAP3O43295 AC008608.2-201ENST00000606089 416 ntBASIC21.91■■□□□ 1.1
SRGAP3O43295 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
SRGAP3O43295 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
SRGAP3O43295 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.91■■□□□ 1.1
SRGAP3O43295 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.9■■□□□ 1.1
SRGAP3O43295 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SRGAP3O43295 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SRGAP3O43295 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SRGAP3O43295 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SRGAP3O43295 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
SRGAP3O43295 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.9■■□□□ 1.1
SRGAP3O43295 RBM17P3-201ENST00000417687 1192 ntBASIC21.9■■□□□ 1.1
SRGAP3O43295 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 TPM4P1-201ENST00000436100 807 ntBASIC21.9■■□□□ 1.1
SRGAP3O43295 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.9■■□□□ 1.1
SRGAP3O43295 AC079781.3-201ENST00000449110 356 ntBASIC21.9■■□□□ 1.1
SRGAP3O43295 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.9■■□□□ 1.1
SRGAP3O43295 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.9■■□□□ 1.1
SRGAP3O43295 AC002558.1-201ENST00000488906 803 ntBASIC21.9■■□□□ 1.1
SRGAP3O43295 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.9■■□□□ 1.1
SRGAP3O43295 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
SRGAP3O43295 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SRGAP3O43295 MTDHP3-201ENST00000594186 672 ntBASIC21.9■■□□□ 1.1
SRGAP3O43295 AL355877.3-201ENST00000622820 899 ntBASIC21.9■■□□□ 1.1
SRGAP3O43295 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.9■■□□□ 1.1
SRGAP3O43295 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
SRGAP3O43295 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SRGAP3O43295 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
SRGAP3O43295 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.9■■□□□ 1.1
SRGAP3O43295 AC132938.5-201ENST00000624980 1813 ntBASIC21.9■■□□□ 1.1
SRGAP3O43295 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
SRGAP3O43295 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
SRGAP3O43295 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.89■■□□□ 1.1
SRGAP3O43295 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
SRGAP3O43295 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
SRGAP3O43295 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SRGAP3O43295 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.89■■□□□ 1.1
SRGAP3O43295 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SRGAP3O43295 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.89■■□□□ 1.09
SRGAP3O43295 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SRGAP3O43295 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SRGAP3O43295 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.89■■□□□ 1.09
SRGAP3O43295 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.89■■□□□ 1.09
SRGAP3O43295 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SRGAP3O43295 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SRGAP3O43295 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms