Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRANK1O15050 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRANK1O15050 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRANK1O15050 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRANK1O15050 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.4■□□□□ 0.54
TRANK1O15050 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TRANK1O15050 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRANK1O15050 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRANK1O15050 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.4■□□□□ 0.54
TRANK1O15050 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRANK1O15050 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.39■□□□□ 0.54
TRANK1O15050 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.39■□□□□ 0.54
TRANK1O15050 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.39■□□□□ 0.54
TRANK1O15050 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRANK1O15050 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
TRANK1O15050 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRANK1O15050 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRANK1O15050 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRANK1O15050 TREML5P-201ENST00000421694 576 ntBASIC18.39■□□□□ 0.53
TRANK1O15050 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.39■□□□□ 0.53
TRANK1O15050 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.39■□□□□ 0.53
TRANK1O15050 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.39■□□□□ 0.53
TRANK1O15050 AC027307.3-201ENST00000594262 1100 ntBASIC18.39■□□□□ 0.53
TRANK1O15050 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRANK1O15050 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRANK1O15050 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRANK1O15050 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRANK1O15050 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRANK1O15050 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.39■□□□□ 0.53
TRANK1O15050 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.39■□□□□ 0.53
TRANK1O15050 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRANK1O15050 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.39■□□□□ 0.53
TRANK1O15050 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.39■□□□□ 0.53
TRANK1O15050 AL358472.5-202ENST00000641448 1267 ntBASIC18.39■□□□□ 0.53
TRANK1O15050 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRANK1O15050 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRANK1O15050 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.39■□□□□ 0.53
TRANK1O15050 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.38■□□□□ 0.53
TRANK1O15050 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 LINC01225-203ENST00000563550 1244 ntBASIC18.38■□□□□ 0.53
TRANK1O15050 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRANK1O15050 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.38■□□□□ 0.53
TRANK1O15050 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 AC002056.1-201ENST00000395613 760 ntBASIC18.38■□□□□ 0.53
TRANK1O15050 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.38■□□□□ 0.53
TRANK1O15050 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.38■□□□□ 0.53
TRANK1O15050 AC097493.3-201ENST00000509725 367 ntBASIC18.38■□□□□ 0.53
TRANK1O15050 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.38■□□□□ 0.53
TRANK1O15050 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRANK1O15050 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRANK1O15050 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRANK1O15050 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRANK1O15050 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRANK1O15050 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRANK1O15050 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRANK1O15050 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRANK1O15050 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.37■□□□□ 0.53
TRANK1O15050 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRANK1O15050 LINC00982-205ENST00000420957 435 ntBASIC18.37■□□□□ 0.53
TRANK1O15050 AC092580.3-201ENST00000430932 139 ntBASIC18.37■□□□□ 0.53
TRANK1O15050 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.37■□□□□ 0.53
TRANK1O15050 AC125807.1-201ENST00000483097 614 ntBASIC18.37■□□□□ 0.53
TRANK1O15050 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.37■□□□□ 0.53
TRANK1O15050 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
TRANK1O15050 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRANK1O15050 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRANK1O15050 PI4KAP1-204ENST00000612579 1703 ntBASIC18.37■□□□□ 0.53
TRANK1O15050 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.37■□□□□ 0.53
TRANK1O15050 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRANK1O15050 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRANK1O15050 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.37■□□□□ 0.53
TRANK1O15050 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms