Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC28.26■■■□□ 2.11
CHD1O14646 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC28.26■■■□□ 2.11
CHD1O14646 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC28.26■■■□□ 2.11
CHD1O14646 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
CHD1O14646 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC28.26■■■□□ 2.11
CHD1O14646 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC28.26■■■□□ 2.11
CHD1O14646 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC28.25■■■□□ 2.11
CHD1O14646 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC28.25■■■□□ 2.11
CHD1O14646 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1O14646 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1O14646 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1O14646 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1O14646 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1O14646 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC28.25■■■□□ 2.11
CHD1O14646 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1O14646 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1O14646 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
CHD1O14646 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1O14646 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC28.25■■■□□ 2.11
CHD1O14646 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC28.25■■■□□ 2.11
CHD1O14646 Six3os1_5.1-201ENST00000611000 271 ntBASIC28.25■■■□□ 2.11
CHD1O14646 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC28.25■■■□□ 2.11
CHD1O14646 AC004840.1-201ENST00000636359 365 ntBASIC28.25■■■□□ 2.11
CHD1O14646 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
CHD1O14646 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
CHD1O14646 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC28.25■■■□□ 2.11
CHD1O14646 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
CHD1O14646 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1O14646 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1O14646 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1O14646 BX276092.7-203ENST00000637198 1536 ntBASIC28.24■■■□□ 2.11
CHD1O14646 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1O14646 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC28.24■■■□□ 2.11
CHD1O14646 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1O14646 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
CHD1O14646 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1O14646 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CHD1O14646 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHD1O14646 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
CHD1O14646 API5-211ENST00000534695 560 ntTSL 5 BASIC28.23■■■□□ 2.11
CHD1O14646 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC28.23■■■□□ 2.11
CHD1O14646 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC28.23■■■□□ 2.11
CHD1O14646 MIR6805-201ENST00000615055 62 ntBASIC28.23■■■□□ 2.11
CHD1O14646 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
CHD1O14646 AL161645.1-201ENST00000622716 1255 ntBASIC28.23■■■□□ 2.11
CHD1O14646 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
CHD1O14646 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
CHD1O14646 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC28.23■■■□□ 2.11
CHD1O14646 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
CHD1O14646 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC28.23■■■□□ 2.11
CHD1O14646 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC28.23■■■□□ 2.11
CHD1O14646 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC28.23■■■□□ 2.11
CHD1O14646 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CHD1O14646 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CHD1O14646 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC28.23■■■□□ 2.11
CHD1O14646 MIR4525-201ENST00000580000 75 ntBASIC28.23■■■□□ 2.11
CHD1O14646 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC28.23■■■□□ 2.11
CHD1O14646 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CHD1O14646 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
CHD1O14646 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
CHD1O14646 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
CHD1O14646 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHD1O14646 AC138969.3-201ENST00000546612 1459 ntBASIC28.22■■■□□ 2.11
CHD1O14646 AC138932.2-201ENST00000548268 1459 ntBASIC28.22■■■□□ 2.11
CHD1O14646 AC126755.4-201ENST00000549796 1459 ntBASIC28.22■■■□□ 2.11
CHD1O14646 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CHD1O14646 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC28.22■■■□□ 2.11
CHD1O14646 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC28.22■■■□□ 2.11
CHD1O14646 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC28.22■■■□□ 2.11
CHD1O14646 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC28.22■■■□□ 2.11
CHD1O14646 TP53TG3HP-202ENST00000569755 579 ntBASIC28.22■■■□□ 2.11
CHD1O14646 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CHD1O14646 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CHD1O14646 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
CHD1O14646 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD1O14646 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CHD1O14646 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD1O14646 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CHD1O14646 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CHD1O14646 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC28.21■■■□□ 2.11
CHD1O14646 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CHD1O14646 AC009477.1-201ENST00000452936 217 ntBASIC28.21■■■□□ 2.11
CHD1O14646 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CHD1O14646 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC28.21■■■□□ 2.11
CHD1O14646 MMP17-203ENST00000535004 719 ntTSL 3 BASIC28.21■■■□□ 2.11
CHD1O14646 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC28.21■■■□□ 2.11
CHD1O14646 AC132938.2-201ENST00000579188 680 ntBASIC28.21■■■□□ 2.11
CHD1O14646 AC004790.1-201ENST00000612686 536 ntBASIC28.21■■■□□ 2.11
CHD1O14646 AL591163.1-201ENST00000641757 987 ntBASIC28.21■■■□□ 2.11
CHD1O14646 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CHD1O14646 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CHD1O14646 IGHV3-52-201ENST00000519770 353 ntBASIC28.21■■■□□ 2.11
CHD1O14646 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CHD1O14646 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC28.21■■■□□ 2.11
CHD1O14646 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC28.21■■■□□ 2.11
CHD1O14646 SSH2-210ENST00000582084 560 ntTSL 3 BASIC28.21■■■□□ 2.11
CHD1O14646 MIR4453-201ENST00000584019 89 ntBASIC28.21■■■□□ 2.11
CHD1O14646 ADM-207ENST00000530439 1839 ntTSL 2 BASIC28.2■■■□□ 2.11
CHD1O14646 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
CHD1O14646 AC093677.2-201ENST00000600169 1863 ntBASIC28.2■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms