Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.92■□□□□ 0.3
CDX4O14627 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CDX4O14627 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.92■□□□□ 0.3
CDX4O14627 AL590787.1-201ENST00000568856 1315 ntBASIC16.92■□□□□ 0.3
CDX4O14627 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDX4O14627 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.91■□□□□ 0.3
CDX4O14627 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDX4O14627 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDX4O14627 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDX4O14627 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDX4O14627 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.91■□□□□ 0.3
CDX4O14627 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDX4O14627 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDX4O14627 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDX4O14627 MIR943-201ENST00000401286 94 ntBASIC16.91■□□□□ 0.3
CDX4O14627 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.91■□□□□ 0.3
CDX4O14627 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.91■□□□□ 0.3
CDX4O14627 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDX4O14627 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDX4O14627 IGHV3-52-201ENST00000519770 353 ntBASIC16.91■□□□□ 0.3
CDX4O14627 FAM86C2P-203ENST00000528684 1004 ntBASIC16.91■□□□□ 0.3
CDX4O14627 AC099522.2-201ENST00000607001 744 ntBASIC16.91■□□□□ 0.3
CDX4O14627 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDX4O14627 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDX4O14627 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.91■□□□□ 0.3
CDX4O14627 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDX4O14627 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDX4O14627 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CDX4O14627 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDX4O14627 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDX4O14627 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.9■□□□□ 0.3
CDX4O14627 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.9■□□□□ 0.3
CDX4O14627 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDX4O14627 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.9■□□□□ 0.3
CDX4O14627 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDX4O14627 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CDX4O14627 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.9■□□□□ 0.3
CDX4O14627 AC100803.2-201ENST00000562459 1963 ntBASIC16.9■□□□□ 0.3
CDX4O14627 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.9■□□□□ 0.3
CDX4O14627 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.9■□□□□ 0.3
CDX4O14627 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.9■□□□□ 0.3
CDX4O14627 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.9■□□□□ 0.3
CDX4O14627 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CDX4O14627 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CDX4O14627 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.9■□□□□ 0.3
CDX4O14627 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.9■□□□□ 0.3
CDX4O14627 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.9■□□□□ 0.3
CDX4O14627 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.9■□□□□ 0.3
CDX4O14627 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.9■□□□□ 0.3
CDX4O14627 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.9■□□□□ 0.3
CDX4O14627 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.9■□□□□ 0.3
CDX4O14627 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CDX4O14627 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.9■□□□□ 0.3
CDX4O14627 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.9■□□□□ 0.3
CDX4O14627 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 TUBB3P1-201ENST00000405796 1332 ntBASIC16.9■□□□□ 0.3
CDX4O14627 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.9■□□□□ 0.3
CDX4O14627 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDX4O14627 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDX4O14627 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDX4O14627 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDX4O14627 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDX4O14627 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDX4O14627 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDX4O14627 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CDX4O14627 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDX4O14627 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.89■□□□□ 0.29
CDX4O14627 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.89■□□□□ 0.29
CDX4O14627 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.89■□□□□ 0.29
CDX4O14627 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.89■□□□□ 0.29
CDX4O14627 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.89■□□□□ 0.29
CDX4O14627 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CDX4O14627 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.89■□□□□ 0.29
CDX4O14627 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.89■□□□□ 0.29
CDX4O14627 FAM58DP-201ENST00000428076 619 ntBASIC16.89■□□□□ 0.29
CDX4O14627 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.89■□□□□ 0.29
CDX4O14627 AL592309.1-201ENST00000443127 649 ntBASIC16.89■□□□□ 0.29
CDX4O14627 SPDYE11-202ENST00000450699 704 ntBASIC16.89■□□□□ 0.29
CDX4O14627 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.89■□□□□ 0.29
CDX4O14627 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDX4O14627 SPDYE9P-201ENST00000570642 692 ntBASIC16.89■□□□□ 0.29
CDX4O14627 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.89■□□□□ 0.29
CDX4O14627 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.89■□□□□ 0.29
CDX4O14627 SPDYE10P-202ENST00000612005 668 ntBASIC16.89■□□□□ 0.29
CDX4O14627 SPDYE8P-202ENST00000612377 668 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms