Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFKBIEO00221 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NFKBIEO00221 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFKBIEO00221 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFKBIEO00221 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC21.15■□□□□ 0.98
NFKBIEO00221 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.15■□□□□ 0.98
NFKBIEO00221 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.15■□□□□ 0.98
NFKBIEO00221 SPCS2P4-201ENST00000436160 681 ntBASIC21.15■□□□□ 0.98
NFKBIEO00221 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC21.15■□□□□ 0.98
NFKBIEO00221 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.15■□□□□ 0.98
NFKBIEO00221 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.15■□□□□ 0.98
NFKBIEO00221 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.15■□□□□ 0.98
NFKBIEO00221 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NFKBIEO00221 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.15■□□□□ 0.98
NFKBIEO00221 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFKBIEO00221 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NFKBIEO00221 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NFKBIEO00221 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFKBIEO00221 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFKBIEO00221 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFKBIEO00221 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NFKBIEO00221 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NFKBIEO00221 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NFKBIEO00221 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC21.14■□□□□ 0.97
NFKBIEO00221 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFKBIEO00221 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC21.14■□□□□ 0.97
NFKBIEO00221 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.14■□□□□ 0.97
NFKBIEO00221 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.14■□□□□ 0.97
NFKBIEO00221 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.14■□□□□ 0.97
NFKBIEO00221 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.14■□□□□ 0.97
NFKBIEO00221 CR383656.12-201ENST00000549567 513 ntBASIC21.14■□□□□ 0.97
NFKBIEO00221 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.14■□□□□ 0.97
NFKBIEO00221 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.14■□□□□ 0.97
NFKBIEO00221 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.14■□□□□ 0.97
NFKBIEO00221 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.14■□□□□ 0.97
NFKBIEO00221 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.14■□□□□ 0.97
NFKBIEO00221 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NFKBIEO00221 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.14■□□□□ 0.97
NFKBIEO00221 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NFKBIEO00221 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
NFKBIEO00221 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKBIEO00221 AC009949.1-201ENST00000623048 1830 ntBASIC21.13■□□□□ 0.97
NFKBIEO00221 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKBIEO00221 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.13■□□□□ 0.97
NFKBIEO00221 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.13■□□□□ 0.97
NFKBIEO00221 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NFKBIEO00221 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.13■□□□□ 0.97
NFKBIEO00221 SPDYE14P-201ENST00000442619 822 ntBASIC21.13■□□□□ 0.97
NFKBIEO00221 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NFKBIEO00221 IGHV3-42-201ENST00000520410 361 ntBASIC21.13■□□□□ 0.97
NFKBIEO00221 AC026150.2-201ENST00000564693 1156 ntBASIC21.13■□□□□ 0.97
NFKBIEO00221 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.13■□□□□ 0.97
NFKBIEO00221 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKBIEO00221 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NFKBIEO00221 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.13■□□□□ 0.97
NFKBIEO00221 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NFKBIEO00221 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NFKBIEO00221 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.12■□□□□ 0.97
NFKBIEO00221 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NFKBIEO00221 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NFKBIEO00221 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NFKBIEO00221 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NFKBIEO00221 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.12■□□□□ 0.97
NFKBIEO00221 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.12■□□□□ 0.97
NFKBIEO00221 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NFKBIEO00221 AC002558.1-201ENST00000488906 803 ntBASIC21.12■□□□□ 0.97
NFKBIEO00221 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.12■□□□□ 0.97
NFKBIEO00221 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC21.12■□□□□ 0.97
NFKBIEO00221 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.12■□□□□ 0.97
NFKBIEO00221 AL359881.2-201ENST00000602973 570 ntBASIC21.12■□□□□ 0.97
NFKBIEO00221 AL158211.3-201ENST00000607385 239 ntBASIC21.12■□□□□ 0.97
NFKBIEO00221 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC21.12■□□□□ 0.97
NFKBIEO00221 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NFKBIEO00221 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.12■□□□□ 0.97
NFKBIEO00221 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.12■□□□□ 0.97
NFKBIEO00221 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NFKBIEO00221 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NFKBIEO00221 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC21.12■□□□□ 0.97
NFKBIEO00221 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.12■□□□□ 0.97
NFKBIEO00221 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NFKBIEO00221 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKBIEO00221 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKBIEO00221 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.11■□□□□ 0.97
NFKBIEO00221 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC21.11■□□□□ 0.97
NFKBIEO00221 AC087163.2-201ENST00000457299 853 ntBASIC21.11■□□□□ 0.97
NFKBIEO00221 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NFKBIEO00221 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.11■□□□□ 0.97
NFKBIEO00221 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC21.11■□□□□ 0.97
NFKBIEO00221 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.11■□□□□ 0.97
NFKBIEO00221 RARRES2P8-201ENST00000566335 367 ntBASIC21.11■□□□□ 0.97
NFKBIEO00221 SPDYE22P-201ENST00000582158 798 ntBASIC21.11■□□□□ 0.97
NFKBIEO00221 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.11■□□□□ 0.97
NFKBIEO00221 AC025048.6-201ENST00000634326 1161 ntBASIC21.11■□□□□ 0.97
NFKBIEO00221 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.11■□□□□ 0.97
NFKBIEO00221 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NFKBIEO00221 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
NFKBIEO00221 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKBIEO00221 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.11■□□□□ 0.97
NFKBIEO00221 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NFKBIEO00221 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms