Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
AP3B1O00203 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.88■□□□□ 0.45
AP3B1O00203 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.88■□□□□ 0.45
AP3B1O00203 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.87■□□□□ 0.45
AP3B1O00203 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.87■□□□□ 0.45
AP3B1O00203 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
AP3B1O00203 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.87■□□□□ 0.45
AP3B1O00203 MYCLP1-201ENST00000372451 1075 ntBASIC17.87■□□□□ 0.45
AP3B1O00203 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
AP3B1O00203 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
AP3B1O00203 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.87■□□□□ 0.45
AP3B1O00203 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.87■□□□□ 0.45
AP3B1O00203 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.87■□□□□ 0.45
AP3B1O00203 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.87■□□□□ 0.45
AP3B1O00203 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.87■□□□□ 0.45
AP3B1O00203 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.87■□□□□ 0.45
AP3B1O00203 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
AP3B1O00203 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
AP3B1O00203 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
AP3B1O00203 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.87■□□□□ 0.45
AP3B1O00203 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.86■□□□□ 0.45
AP3B1O00203 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
AP3B1O00203 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
AP3B1O00203 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
AP3B1O00203 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 PRORSD1P-202ENST00000563365 2154 ntBASIC17.86■□□□□ 0.45
AP3B1O00203 PP12613-201ENST00000424958 2230 ntBASIC17.86■□□□□ 0.45
AP3B1O00203 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
AP3B1O00203 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.86■□□□□ 0.45
AP3B1O00203 AL645929.1-201ENST00000420084 975 ntBASIC17.86■□□□□ 0.45
AP3B1O00203 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.86■□□□□ 0.45
AP3B1O00203 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.86■□□□□ 0.45
AP3B1O00203 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
AP3B1O00203 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 AC090616.6-201ENST00000582640 721 ntBASIC17.86■□□□□ 0.45
AP3B1O00203 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.86■□□□□ 0.45
AP3B1O00203 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.86■□□□□ 0.45
AP3B1O00203 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.86■□□□□ 0.45
AP3B1O00203 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.86■□□□□ 0.45
AP3B1O00203 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 AC108860.2-201ENST00000562760 2183 ntBASIC17.86■□□□□ 0.45
AP3B1O00203 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
AP3B1O00203 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.86■□□□□ 0.45
AP3B1O00203 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
AP3B1O00203 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3B1O00203 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
AP3B1O00203 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.85■□□□□ 0.45
AP3B1O00203 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3B1O00203 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.85■□□□□ 0.45
AP3B1O00203 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3B1O00203 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3B1O00203 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
AP3B1O00203 RNF126P1-202ENST00000569893 925 ntBASIC17.85■□□□□ 0.45
AP3B1O00203 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
AP3B1O00203 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
AP3B1O00203 AC083849.1-201ENST00000615227 514 ntBASIC17.85■□□□□ 0.45
AP3B1O00203 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.85■□□□□ 0.45
AP3B1O00203 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.85■□□□□ 0.45
AP3B1O00203 OR6D1P-203ENST00000641209 4860 ntBASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms