Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX39AO00148 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
DDX39AO00148 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX39AO00148 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DDX39AO00148 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.89■□□□□ 0.77
DDX39AO00148 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX39AO00148 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX39AO00148 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DDX39AO00148 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.89■□□□□ 0.77
DDX39AO00148 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.89■□□□□ 0.77
DDX39AO00148 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.89■□□□□ 0.77
DDX39AO00148 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX39AO00148 AC018470.1-201ENST00000624790 3129 ntBASIC19.89■□□□□ 0.77
DDX39AO00148 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX39AO00148 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DDX39AO00148 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.88■□□□□ 0.77
DDX39AO00148 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.88■□□□□ 0.77
DDX39AO00148 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DDX39AO00148 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX39AO00148 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX39AO00148 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DDX39AO00148 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX39AO00148 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX39AO00148 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.88■□□□□ 0.77
DDX39AO00148 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.88■□□□□ 0.77
DDX39AO00148 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.88■□□□□ 0.77
DDX39AO00148 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX39AO00148 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX39AO00148 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX39AO00148 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX39AO00148 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.88■□□□□ 0.77
DDX39AO00148 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DDX39AO00148 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
DDX39AO00148 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DDX39AO00148 AP000867.4-201ENST00000641616 219 ntBASIC19.88■□□□□ 0.77
DDX39AO00148 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.88■□□□□ 0.77
DDX39AO00148 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DDX39AO00148 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
DDX39AO00148 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
DDX39AO00148 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
DDX39AO00148 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DDX39AO00148 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
DDX39AO00148 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX39AO00148 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
DDX39AO00148 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.87■□□□□ 0.77
DDX39AO00148 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX39AO00148 AC004817.3-201ENST00000602957 2129 ntBASIC19.87■□□□□ 0.77
DDX39AO00148 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX39AO00148 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
DDX39AO00148 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX39AO00148 AL356309.3-201ENST00000624132 1934 ntBASIC19.87■□□□□ 0.77
DDX39AO00148 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX39AO00148 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.87■□□□□ 0.77
DDX39AO00148 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX39AO00148 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX39AO00148 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX39AO00148 KRT18P67-201ENST00000432816 1264 ntBASIC19.87■□□□□ 0.77
DDX39AO00148 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX39AO00148 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX39AO00148 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.87■□□□□ 0.77
DDX39AO00148 AF186996.4-201ENST00000467186 377 ntBASIC19.87■□□□□ 0.77
DDX39AO00148 BX005266.1-201ENST00000473402 457 ntBASIC19.87■□□□□ 0.77
DDX39AO00148 RNPS1P1-201ENST00000507437 918 ntBASIC19.87■□□□□ 0.77
DDX39AO00148 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.87■□□□□ 0.77
DDX39AO00148 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.87■□□□□ 0.77
DDX39AO00148 NKAPP1-205ENST00000585790 367 ntBASIC19.87■□□□□ 0.77
DDX39AO00148 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX39AO00148 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX39AO00148 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.87■□□□□ 0.77
DDX39AO00148 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.87■□□□□ 0.77
DDX39AO00148 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX39AO00148 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
DDX39AO00148 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.87■□□□□ 0.77
DDX39AO00148 AC012317.2-201ENST00000623305 2251 ntBASIC19.87■□□□□ 0.77
DDX39AO00148 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX39AO00148 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
DDX39AO00148 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
DDX39AO00148 BX276092.7-203ENST00000637198 1536 ntBASIC19.86■□□□□ 0.77
DDX39AO00148 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
DDX39AO00148 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.86■□□□□ 0.77
DDX39AO00148 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
DDX39AO00148 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.86■□□□□ 0.77
DDX39AO00148 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 HLA-A-201ENST00000376802 1334 ntBASIC19.86■□□□□ 0.77
DDX39AO00148 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.86■□□□□ 0.77
DDX39AO00148 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 DDX43P3-201ENST00000441064 443 ntBASIC19.86■□□□□ 0.77
DDX39AO00148 SCARNA2-201ENST00000458748 420 ntBASIC19.86■□□□□ 0.77
DDX39AO00148 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
DDX39AO00148 AC073648.2-201ENST00000510116 352 ntBASIC19.86■□□□□ 0.77
DDX39AO00148 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 AL662844.1-201ENST00000546340 181 ntBASIC19.86■□□□□ 0.77
DDX39AO00148 AC021087.4-201ENST00000563761 564 ntBASIC19.86■□□□□ 0.77
DDX39AO00148 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms