Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP17L4A6NCW7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
USP17L4A6NCW7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP17L4A6NCW7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP17L4A6NCW7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC21.2■□□□□ 0.98
USP17L4A6NCW7 AC096734.2-201ENST00000562054 433 ntBASIC21.2■□□□□ 0.98
USP17L4A6NCW7 PDPK2P-202ENST00000562415 1191 ntBASIC21.2■□□□□ 0.98
USP17L4A6NCW7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC21.2■□□□□ 0.98
USP17L4A6NCW7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.2■□□□□ 0.98
USP17L4A6NCW7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP17L4A6NCW7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP17L4A6NCW7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP17L4A6NCW7 BX276092.7-203ENST00000637198 1536 ntBASIC21.19■□□□□ 0.98
USP17L4A6NCW7 AC097637.2-201ENST00000624096 1997 ntBASIC21.19■□□□□ 0.98
USP17L4A6NCW7 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 IGHV3-52-201ENST00000519770 353 ntBASIC21.19■□□□□ 0.98
USP17L4A6NCW7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 AC010507.1-201ENST00000633895 436 ntBASIC21.19■□□□□ 0.98
USP17L4A6NCW7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.19■□□□□ 0.98
USP17L4A6NCW7 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 AC093677.2-201ENST00000600169 1863 ntBASIC21.18■□□□□ 0.98
USP17L4A6NCW7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 AC100803.2-201ENST00000562459 1963 ntBASIC21.18■□□□□ 0.98
USP17L4A6NCW7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 AP002414.1-201ENST00000391405 1147 ntBASIC21.18■□□□□ 0.98
USP17L4A6NCW7 AP002472.1-201ENST00000577490 586 ntBASIC21.18■□□□□ 0.98
USP17L4A6NCW7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 AL353135.1-201ENST00000606729 504 ntBASIC21.18■□□□□ 0.98
USP17L4A6NCW7 GGTLC5P-201ENST00000617623 998 ntBASIC21.18■□□□□ 0.98
USP17L4A6NCW7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 BCAR1-209ENST00000546196 1340 ntBASIC21.18■□□□□ 0.98
USP17L4A6NCW7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 AC009113.1-201ENST00000570267 2443 ntBASIC21.18■□□□□ 0.98
USP17L4A6NCW7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 AC009336.1-201ENST00000608941 1553 ntBASIC21.18■□□□□ 0.98
USP17L4A6NCW7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
USP17L4A6NCW7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 AL645939.2-201ENST00000427340 991 ntBASIC21.17■□□□□ 0.98
USP17L4A6NCW7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.17■□□□□ 0.98
USP17L4A6NCW7 KRT19P2-202ENST00000557173 1012 ntBASIC21.17■□□□□ 0.98
USP17L4A6NCW7 AL031432.2-201ENST00000566714 459 ntBASIC21.17■□□□□ 0.98
USP17L4A6NCW7 AL928711.1-201ENST00000570165 459 ntBASIC21.17■□□□□ 0.98
USP17L4A6NCW7 OR7E47P-204ENST00000575924 449 ntBASIC21.17■□□□□ 0.98
USP17L4A6NCW7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms