Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC162PA2VCL2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 MIR1224-201ENST00000408193 85 ntBASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 AC091607.1-201ENST00000490318 1060 ntBASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 AC011840.4-201ENST00000578471 627 ntBASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 AC005336.2-201ENST00000593183 939 ntBASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 AL358472.4-201ENST00000633140 710 ntBASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 AC097374.2-201ENST00000618617 1306 ntBASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC162PA2VCL2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 ARMC10P1-201ENST00000313754 855 ntBASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 TSSC2-201ENST00000450217 709 ntBASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 AP000550.4-202ENST00000639755 178 ntBASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC162PA2VCL2 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 AC139713.2-201ENST00000641328 2723 ntBASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 AC125634.1-201ENST00000438758 1403 ntBASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC162PA2VCL2 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms