Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 AC092647.4-201ENST00000457211 535 ntBASIC16.01■□□□□ 0.15
TMEM129A0AVI4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TMEM129A0AVI4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16■□□□□ 0.15
TMEM129A0AVI4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16■□□□□ 0.15
TMEM129A0AVI4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TMEM129A0AVI4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16■□□□□ 0.15
TMEM129A0AVI4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 AC132938.6-201ENST00000623828 1655 ntBASIC16■□□□□ 0.15
TMEM129A0AVI4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16■□□□□ 0.15
TMEM129A0AVI4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16■□□□□ 0.15
TMEM129A0AVI4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16■□□□□ 0.15
TMEM129A0AVI4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16■□□□□ 0.15
TMEM129A0AVI4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16■□□□□ 0.15
TMEM129A0AVI4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16■□□□□ 0.15
TMEM129A0AVI4 AL359075.1-203ENST00000462729 1002 ntBASIC16■□□□□ 0.15
TMEM129A0AVI4 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16■□□□□ 0.15
TMEM129A0AVI4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16■□□□□ 0.15
TMEM129A0AVI4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16■□□□□ 0.15
TMEM129A0AVI4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TMEM129A0AVI4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16■□□□□ 0.15
TMEM129A0AVI4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TMEM129A0AVI4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
TMEM129A0AVI4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TMEM129A0AVI4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 KRT18P23-201ENST00000435622 1283 ntBASIC15.99■□□□□ 0.15
TMEM129A0AVI4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM129A0AVI4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms