Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 AC073621.1-201ENST00000392730 636 ntBASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 AC009947.1-201ENST00000444350 727 ntBASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 KRT18P3-201ENST00000451602 1288 ntBASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 STK19B-204ENST00000512515 211 ntBASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 STK25P1-201ENST00000585406 838 ntBASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 KRT18P55-202ENST00000578578 1546 ntBASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 AC002558.1-201ENST00000488906 803 ntBASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 AC004706.3-202ENST00000621574 984 ntBASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV19A0A0A6YYK7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 MYCLP1-201ENST00000372451 1075 ntBASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 RNA5SP416-201ENST00000516838 111 ntBASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 PGAM5P1-201ENST00000518923 814 ntBASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 AC139530.3-201ENST00000620344 690 ntBASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV19A0A0A6YYK7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV19A0A0A6YYK7 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms