Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC21.29■■□□□ 1
DDX49Q9Y6V7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC21.29■■□□□ 1
DDX49Q9Y6V7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX49Q9Y6V7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.28■■□□□ 1
DDX49Q9Y6V7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX49Q9Y6V7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX49Q9Y6V7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX49Q9Y6V7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
DDX49Q9Y6V7 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX49Q9Y6V7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC21.28■■□□□ 1
DDX49Q9Y6V7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
DDX49Q9Y6V7 AC016734.2-201ENST00000624325 1377 ntBASIC21.28■■□□□ 1
DDX49Q9Y6V7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
DDX49Q9Y6V7 ATP5G2P1-201ENST00000433580 426 ntBASIC21.28■■□□□ 1
DDX49Q9Y6V7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.28■■□□□ 1
DDX49Q9Y6V7 AC112497.1-201ENST00000624824 639 ntBASIC21.28■■□□□ 1
DDX49Q9Y6V7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.28■■□□□ 1
DDX49Q9Y6V7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
DDX49Q9Y6V7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
DDX49Q9Y6V7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
DDX49Q9Y6V7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.28■■□□□ 1
DDX49Q9Y6V7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
DDX49Q9Y6V7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX49Q9Y6V7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.28■■□□□ 1
DDX49Q9Y6V7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 AP002383.4-201ENST00000442518 975 ntBASIC21.27■■□□□ 1
DDX49Q9Y6V7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 AC099343.3-201ENST00000605834 2503 ntBASIC21.27■■□□□ 1
DDX49Q9Y6V7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
DDX49Q9Y6V7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
DDX49Q9Y6V7 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
DDX49Q9Y6V7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.27■□□□□ 0.99
DDX49Q9Y6V7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
DDX49Q9Y6V7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC21.27■□□□□ 0.99
DDX49Q9Y6V7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
DDX49Q9Y6V7 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 NKILA-202ENST00000614771 2598 ntBASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 AC034232.1-201ENST00000506026 1064 ntBASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 RNF126P1-202ENST00000569893 925 ntBASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 MIR3180-1-201ENST00000580374 94 ntBASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 MIR3180-3-201ENST00000584616 94 ntBASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 AC011498.5-201ENST00000592027 486 ntBASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 AC006116.8-202ENST00000587620 1550 ntBASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 AC011676.5-201ENST00000624864 2660 ntBASIC21.26■□□□□ 0.99
DDX49Q9Y6V7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms