Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
USH1CQ9Y6N9 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.66■□□□□ 0.42
USH1CQ9Y6N9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
USH1CQ9Y6N9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
USH1CQ9Y6N9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USH1CQ9Y6N9 AC096733.2-201ENST00000609937 1394 ntBASIC17.66■□□□□ 0.42
USH1CQ9Y6N9 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
USH1CQ9Y6N9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USH1CQ9Y6N9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 FSCN1P1-201ENST00000568912 1481 ntBASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 AL355802.2-201ENST00000402069 882 ntBASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 DUTP2-201ENST00000519164 463 ntBASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 AC073195.1-201ENST00000607241 877 ntBASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.65■□□□□ 0.42
USH1CQ9Y6N9 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.64■□□□□ 0.42
USH1CQ9Y6N9 HOXB1-202ENST00000577092 1414 ntBASIC17.64■□□□□ 0.42
USH1CQ9Y6N9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 AF186192.3-201ENST00000583427 947 ntBASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 AL024508.2-201ENST00000607749 1894 ntBASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 AC100803.2-201ENST00000562459 1963 ntBASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.64■□□□□ 0.41
USH1CQ9Y6N9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 MIR4674-201ENST00000582457 87 ntBASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
USH1CQ9Y6N9 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms