Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLIC4Q9Y696 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 AD000864.1-201ENST00000624076 2295 ntBASIC20.18■□□□□ 0.82
CLIC4Q9Y696 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CLIC4Q9Y696 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 AL645929.1-201ENST00000420084 975 ntBASIC20.17■□□□□ 0.82
CLIC4Q9Y696 TMPOP1-202ENST00000424642 1267 ntBASIC20.17■□□□□ 0.82
CLIC4Q9Y696 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.17■□□□□ 0.82
CLIC4Q9Y696 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CLIC4Q9Y696 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.16■□□□□ 0.82
CLIC4Q9Y696 RN7SL606P-201ENST00000472779 293 ntBASIC20.16■□□□□ 0.82
CLIC4Q9Y696 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLIC4Q9Y696 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms