Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 PMPCAP1-201ENST00000508114 1576 ntBASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 AC098831.1-202ENST00000438821 336 ntBASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 AC107918.4-202ENST00000641623 219 ntBASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 PMS2P7-201ENST00000506558 1336 ntBASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 SIRPAP1-201ENST00000448467 1770 ntBASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 BX323043.1-201ENST00000641006 1765 ntBASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 AC104109.2-201ENST00000602919 1418 ntBASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.43■□□□□ 0.86
CTDP1Q9Y5B0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 KRT18P13-201ENST00000400056 1290 ntBASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 LAGE3P1-201ENST00000425356 484 ntBASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 MIR1199-201ENST00000621445 119 ntBASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CTDP1Q9Y5B0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 AC093677.2-201ENST00000600169 1863 ntBASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 AC092865.5-201ENST00000545435 363 ntBASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 AC012640.2-201ENST00000561606 901 ntBASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 AD001527.2-201ENST00000622994 785 ntBASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 AC135776.1-201ENST00000319817 2481 ntBASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTDP1Q9Y5B0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 AC006538.3-201ENST00000612495 578 ntBASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CTDP1Q9Y5B0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CTDP1Q9Y5B0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CTDP1Q9Y5B0 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CTDP1Q9Y5B0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CTDP1Q9Y5B0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.39■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms