Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.31■□□□□ 0.84
R3HCC1Q9Y3T6 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 AL499627.1-201ENST00000569373 2188 ntBASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 FAM87A-204ENST00000613235 858 ntBASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
R3HCC1Q9Y3T6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
R3HCC1Q9Y3T6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC20.28■□□□□ 0.84
R3HCC1Q9Y3T6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms