Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFT52Q9Y366 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.62■□□□□ 0.25
IFT52Q9Y366 LINC00602-201ENST00000629776 2065 ntBASIC16.61■□□□□ 0.25
IFT52Q9Y366 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.61■□□□□ 0.25
IFT52Q9Y366 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.61■□□□□ 0.25
IFT52Q9Y366 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.61■□□□□ 0.25
IFT52Q9Y366 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
IFT52Q9Y366 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
IFT52Q9Y366 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.61■□□□□ 0.25
IFT52Q9Y366 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.61■□□□□ 0.25
IFT52Q9Y366 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.61■□□□□ 0.25
IFT52Q9Y366 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
IFT52Q9Y366 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
IFT52Q9Y366 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFT52Q9Y366 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
IFT52Q9Y366 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT52Q9Y366 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT52Q9Y366 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.6■□□□□ 0.25
IFT52Q9Y366 RASA4DP-201ENST00000460726 1199 ntBASIC16.6■□□□□ 0.25
IFT52Q9Y366 COX11P1-201ENST00000489116 835 ntBASIC16.6■□□□□ 0.25
IFT52Q9Y366 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.6■□□□□ 0.25
IFT52Q9Y366 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.6■□□□□ 0.25
IFT52Q9Y366 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.6■□□□□ 0.25
IFT52Q9Y366 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT52Q9Y366 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.6■□□□□ 0.25
IFT52Q9Y366 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.6■□□□□ 0.25
IFT52Q9Y366 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.6■□□□□ 0.25
IFT52Q9Y366 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFT52Q9Y366 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT52Q9Y366 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IFT52Q9Y366 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT52Q9Y366 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
IFT52Q9Y366 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
IFT52Q9Y366 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
IFT52Q9Y366 AC022211.2-201ENST00000585075 2527 ntBASIC16.59■□□□□ 0.25
IFT52Q9Y366 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
IFT52Q9Y366 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
IFT52Q9Y366 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IFT52Q9Y366 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT52Q9Y366 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
IFT52Q9Y366 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT52Q9Y366 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT52Q9Y366 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
IFT52Q9Y366 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.59■□□□□ 0.25
IFT52Q9Y366 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.59■□□□□ 0.25
IFT52Q9Y366 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.59■□□□□ 0.25
IFT52Q9Y366 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.59■□□□□ 0.25
IFT52Q9Y366 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.59■□□□□ 0.25
IFT52Q9Y366 KRT18P65-201ENST00000439811 1286 ntBASIC16.59■□□□□ 0.25
IFT52Q9Y366 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms