Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PENK-204ENST00000518770 863 ntTSL 2 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 MIR4651-201ENST00000582622 73 ntBASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 AC016396.2-201ENST00000562575 1417 ntBASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UBE2D4Q9Y2X8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
UBE2D4Q9Y2X8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 AC012618.2-201ENST00000428058 849 ntBASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 SEC1P-202ENST00000473944 940 ntBASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 CD99P1-205ENST00000527459 561 ntBASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 AC026471.5-201ENST00000615068 467 ntBASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 AC116562.4-202ENST00000641738 218 ntBASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 MED29-202ENST00000594368 1471 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UBE2D4Q9Y2X8 AGGF1P2-201ENST00000426656 2106 ntBASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms