Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MRPS28Q9Y2Q9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 AC011676.5-201ENST00000624864 2660 ntBASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 SNORA78-201ENST00000459373 127 ntBASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 NAPSB-206ENST00000562112 1266 ntBASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 FER1L4-210ENST00000615531 5998 ntBASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MRPS28Q9Y2Q9 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 AP000523.1-201ENST00000398242 1049 ntBASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 CYP2D8P-201ENST00000433633 1490 ntBASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 AC124067.4-201ENST00000519691 2379 ntBASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
MRPS28Q9Y2Q9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms