Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 ASL-204ENST00000395331 1538 ntTSL 5 BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RCL1Q9Y2P8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 HOXB1-202ENST00000577092 1414 ntBASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 AC011506.1-201ENST00000474329 610 ntBASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 AP003097.1-201ENST00000530657 1135 ntBASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 AL031985.4-201ENST00000642138 673 ntBASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 LINC00554-201ENST00000564841 3011 ntBASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RCL1Q9Y2P8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 AC124016.1-201ENST00000609552 612 ntBASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 LINC01451-201ENST00000623792 534 ntBASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
RCL1Q9Y2P8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms