Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SLC52A1Q9NWF4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
SLC52A1Q9NWF4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 AC093520.2-201ENST00000561830 333 ntBASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 AC009093.7-201ENST00000623853 1223 ntBASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SLC52A1Q9NWF4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC25.09■■□□□ 1.61
SLC52A1Q9NWF4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 AL513480.1-201ENST00000451731 511 ntBASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 GATB-205ENST00000508611 605 ntTSL 2 BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC25.08■■□□□ 1.61
SLC52A1Q9NWF4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
SLC52A1Q9NWF4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
SLC52A1Q9NWF4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 AC002056.1-201ENST00000395613 760 ntBASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 AL627223.1-201ENST00000416693 442 ntBASIC25.07■■□□□ 1.6
SLC52A1Q9NWF4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms