Protein–RNA interactions for Protein: Q9NUQ9

FAM49B, Protein FAM49B, humanhuman

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49BQ9NUQ9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM49BQ9NUQ9 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM49BQ9NUQ9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM49BQ9NUQ9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
FAM49BQ9NUQ9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
FAM49BQ9NUQ9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
FAM49BQ9NUQ9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 AC067852.2-201ENST00000590513 2313 ntBASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
FAM49BQ9NUQ9 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 AC068880.1-201ENST00000507289 2297 ntBASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 COX5BP2-201ENST00000392354 334 ntBASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 AC132008.2-207ENST00000454517 770 ntBASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 LINC01711-201ENST00000598340 967 ntBASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 AL121894.2-201ENST00000602977 491 ntBASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 AC134043.2-201ENST00000624206 2238 ntBASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 BX276092.7-203ENST00000637198 1536 ntBASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
FAM49BQ9NUQ9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 AKR1C7P-201ENST00000305623 895 ntBASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 EMBP1-201ENST00000458200 901 ntBASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 RN7SL510P-201ENST00000581311 263 ntBASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FAM49BQ9NUQ9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms