Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 PLAC8-201ENST00000311507 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 KRT17P6-201ENST00000453795 1220 ntBASIC19.78■□□□□ 0.76
RNF39Q9H2S5 RPL23AP68-201ENST00000480924 445 ntBASIC19.78■□□□□ 0.76
RNF39Q9H2S5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 AC104819.1-201ENST00000504587 486 ntBASIC19.78■□□□□ 0.76
RNF39Q9H2S5 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 U6.48-201ENST00000618523 106 ntBASIC19.78■□□□□ 0.76
RNF39Q9H2S5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF39Q9H2S5 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 USP9YP19-201ENST00000412165 485 ntBASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AC104685.1-201ENST00000502445 371 ntBASIC19.77■□□□□ 0.76
RNF39Q9H2S5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 REXO2-218ENST00000544827 880 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AC138894.3-201ENST00000603787 634 ntBASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AC013244.3-201ENST00000605614 388 ntBASIC19.77■□□□□ 0.76
RNF39Q9H2S5 IFNL4P1-201ENST00000607083 540 ntBASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AC007620.3-201ENST00000608131 497 ntBASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AC022306.3-201ENST00000619930 550 ntBASIC19.77■□□□□ 0.76
RNF39Q9H2S5 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF39Q9H2S5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 DLEU1-201ENST00000378180 981 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 TMEM213-201ENST00000397602 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 Y_RNA.604-201ENST00000410574 102 ntBASIC19.76■□□□□ 0.75
RNF39Q9H2S5 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 AC246785.2-201ENST00000432512 513 ntBASIC19.76■□□□□ 0.75
RNF39Q9H2S5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 EMBP1-201ENST00000458200 901 ntBASIC19.76■□□□□ 0.75
RNF39Q9H2S5 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF39Q9H2S5 LINC02251-201ENST00000554798 1224 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms