Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RSPO3Q9BXY4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RSPO3Q9BXY4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RSPO3Q9BXY4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 AC016396.2-201ENST00000562575 1417 ntBASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 AC007967.3-201ENST00000434308 558 ntBASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 DUX4L26-201ENST00000489078 1255 ntBASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 AC022616.7-201ENST00000525383 220 ntBASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 LINC01023-201ENST00000606054 436 ntBASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
RSPO3Q9BXY4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 FLJ38576-201ENST00000623820 2459 ntBASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 AC091607.1-201ENST00000490318 1060 ntBASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RSPO3Q9BXY4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RSPO3Q9BXY4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.21■□□□□ 0.18
RSPO3Q9BXY4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.18
RSPO3Q9BXY4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RSPO3Q9BXY4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RSPO3Q9BXY4 AC125634.1-201ENST00000438758 1403 ntBASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 UBALD1-205ENST00000590891 2641 ntBASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 AL671277.2-201ENST00000458060 996 ntBASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.2■□□□□ 0.18
RSPO3Q9BXY4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms