Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 KRT223P-202ENST00000449164 1292 ntBASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 MIR4453-201ENST00000584019 89 ntBASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LRFN3Q9BTN0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 ALG1L8P-201ENST00000533887 760 ntBASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRFN3Q9BTN0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 RN7SL219P-201ENST00000582872 296 ntBASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 AC133552.6-201ENST00000613406 534 ntBASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 MIR6869-201ENST00000619434 62 ntBASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRFN3Q9BTN0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 LINC00982-205ENST00000420957 435 ntBASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.47■□□□□ 0.39
LRFN3Q9BTN0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms