Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 AL845331.1-201ENST00000424978 1190 ntBASIC12.34□□□□□ -0.43
UPK3BQ9BT76 MTCL1P1-201ENST00000446207 792 ntBASIC12.34□□□□□ -0.43
UPK3BQ9BT76 FAAHP1-202ENST00000446499 1238 ntBASIC12.34□□□□□ -0.43
UPK3BQ9BT76 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 AC091304.2-201ENST00000564639 760 ntBASIC12.34□□□□□ -0.43
UPK3BQ9BT76 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 LINC00602-201ENST00000629776 2065 ntBASIC12.34□□□□□ -0.43
UPK3BQ9BT76 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.34□□□□□ -0.43
UPK3BQ9BT76 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
UPK3BQ9BT76 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
UPK3BQ9BT76 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
UPK3BQ9BT76 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
UPK3BQ9BT76 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 AC004870.1-201ENST00000315132 882 ntBASIC12.33□□□□□ -0.44
UPK3BQ9BT76 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 KRT16P4-201ENST00000453883 522 ntBASIC12.33□□□□□ -0.44
UPK3BQ9BT76 MINOS1P3-201ENST00000457048 203 ntBASIC12.33□□□□□ -0.44
UPK3BQ9BT76 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 KRT18P31-201ENST00000506277 1292 ntBASIC12.33□□□□□ -0.44
UPK3BQ9BT76 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 TBCB-205ENST00000585746 875 ntTSL 3 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 AC099336.1-202ENST00000602961 463 ntBASIC12.33□□□□□ -0.44
UPK3BQ9BT76 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 CCNC-219ENST00000627680 896 ntTSL 5 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.33□□□□□ -0.44
UPK3BQ9BT76 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms