Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CPPED1Q9BRF8 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 TSPY12P-201ENST00000421279 868 ntBASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CPPED1Q9BRF8 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 AL023973.1-201ENST00000624619 620 ntBASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 AP006294.2-201ENST00000641667 209 ntBASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.62■□□□□ 0.25
CPPED1Q9BRF8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.61■□□□□ 0.25
CPPED1Q9BRF8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms