Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS2Q99743 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NPAS2Q99743 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS2Q99743 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
NPAS2Q99743 AP000523.1-201ENST00000398242 1049 ntBASIC17.35■□□□□ 0.37
NPAS2Q99743 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NPAS2Q99743 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS2Q99743 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS2Q99743 SPDYE15P-201ENST00000424157 909 ntBASIC17.35■□□□□ 0.37
NPAS2Q99743 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.35■□□□□ 0.37
NPAS2Q99743 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS2Q99743 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.35■□□□□ 0.37
NPAS2Q99743 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.35■□□□□ 0.37
NPAS2Q99743 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.35■□□□□ 0.37
NPAS2Q99743 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS2Q99743 HYMAI.1-201ENST00000620949 238 ntBASIC17.35■□□□□ 0.37
NPAS2Q99743 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NPAS2Q99743 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NPAS2Q99743 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS2Q99743 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS2Q99743 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
NPAS2Q99743 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.35■□□□□ 0.37
NPAS2Q99743 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS2Q99743 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NPAS2Q99743 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
NPAS2Q99743 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.35■□□□□ 0.37
NPAS2Q99743 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NPAS2Q99743 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS2Q99743 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS2Q99743 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS2Q99743 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NPAS2Q99743 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NPAS2Q99743 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NPAS2Q99743 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.34■□□□□ 0.37
NPAS2Q99743 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NPAS2Q99743 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS2Q99743 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.34■□□□□ 0.37
NPAS2Q99743 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.34■□□□□ 0.37
NPAS2Q99743 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS2Q99743 AL671277.2-201ENST00000458060 996 ntBASIC17.34■□□□□ 0.37
NPAS2Q99743 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 FAM86EP-206ENST00000510506 987 ntBASIC17.34■□□□□ 0.37
NPAS2Q99743 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 MIR3180-5-201ENST00000583743 153 ntBASIC17.34■□□□□ 0.37
NPAS2Q99743 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NPAS2Q99743 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS2Q99743 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS2Q99743 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.34■□□□□ 0.37
NPAS2Q99743 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS2Q99743 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.33■□□□□ 0.37
NPAS2Q99743 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS2Q99743 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.33■□□□□ 0.37
NPAS2Q99743 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS2Q99743 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.33■□□□□ 0.37
NPAS2Q99743 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS2Q99743 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.33■□□□□ 0.37
NPAS2Q99743 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
NPAS2Q99743 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS2Q99743 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS2Q99743 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS2Q99743 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.33■□□□□ 0.36
NPAS2Q99743 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS2Q99743 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NPAS2Q99743 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.33■□□□□ 0.36
NPAS2Q99743 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS2Q99743 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.33■□□□□ 0.36
NPAS2Q99743 STARP1-201ENST00000397973 869 ntBASIC17.33■□□□□ 0.36
NPAS2Q99743 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS2Q99743 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.33■□□□□ 0.36
NPAS2Q99743 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.33■□□□□ 0.36
NPAS2Q99743 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.33■□□□□ 0.36
NPAS2Q99743 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.33■□□□□ 0.36
NPAS2Q99743 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.33■□□□□ 0.36
NPAS2Q99743 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS2Q99743 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS2Q99743 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS2Q99743 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
NPAS2Q99743 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.33■□□□□ 0.36
NPAS2Q99743 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS2Q99743 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.33■□□□□ 0.36
NPAS2Q99743 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS2Q99743 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS2Q99743 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.33■□□□□ 0.36
NPAS2Q99743 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 AL138688.1-201ENST00000624851 1594 ntBASIC17.32■□□□□ 0.36
NPAS2Q99743 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS2Q99743 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms